Detailed information on CNT0000653 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000653

Sequence

>CNT0000653
TGTGGATGCAGATAGCGGTCCAACTTAATTTGCTCTGTCAGGCCAGCTGAAACAAATGTCAAAACAAAACAAAACTATTAGCATGGAACTAAACACATAA
GAATGAATTAAGTGTCATGACATTGAAGTTCCTATTGTACATTGGATGATTTCCAGACTCTCAAACTATAACACCGCAAAAAATTAGCTTTATAGCATAA
AAT

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA05G02940.1 protein coding CNT0000653 525 203 CDS Trans
GLYMA05G02980.1 Putative uncharacterized protein protein coding CNT0000653 546 203 CDS Cis
GLYMA17G13640.1 Putative uncharacterized protein protein coding CNT0000653 307 159 CDS Trans