Detailed information on CNT0000679 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P26204|BGLS_TRIRP, E-value = 8e-16

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0000679

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00.421000000.4617.1999.4581.7893.420.84400leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.511.522.533.544.555.566.577.588.599.510

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MASLACNTFIVSSTLRSVVTRAEPPKPGPLFDLSSFNRHSFPAGFTFGASSSAYQFEGAAKEYGRGPSIWDTFINQHPG

Sequence

>CNT0000679
GTGCATTCAGCATTGATCAGAATCATCCTTGAATAGATCACATAACATGGCATCATTGGCATGCAACACGTTTATTGTTAGCAGCACGTTAAGATCAGTT
GTTACTCGTGCGGAACCACCTAAACCTGGTCCTCTTTTCGATCTTAGTTCATTCAATCGCCACAGCTTTCCGGCAGGCTTCACTTTCGGGGCATCATCTT
CCGCGTACCAGTTTGAAGGTGCGGCAAAAGAATATGGTAGAGGACCAAGTATATGGGATACTTTCATCAATCAACATCCAGGT