Detailed information on CNT0000682 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8S919|UBC5B_ORYSJ, E-value = 2e-33

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0021795, E-value = 4e-24 (A. trichopoda)
CNT0009352, E-value = 1e-14 (S. tuberosum)

Expression of CNT0000682

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MFHWQATKMDPPYSPYVGGVFLVTIHFPPDYPFKPPKVLA*

>peptide 2 (92 aa)
GRLKLMVTMNFNKIHCFTVLLHIFFKSVKGCFLLQLLSCYLPMANKQVVHLWECDLWRERRICPSLCSLPRPIEREYSSMASKRILKELKDL*

Sequence

>CNT0000682
CGGTAGATTAAAATTAATGGTTACGATGAATTTTAACAAAATTCACTGTTTTACAGTTTTACTTCACATATTTTTTAAGTCAGTCAAAGGTTGCTTCCTT
TTACAACTTCTTTCATGTTATCTTCCTATGGCTAACAAGCAAGTAGTACATCTTTGGGAGTGCGACTTATGGAGGGAGAGGCGAATTTGTCCAAGCTTAT
GCTCACTTCCCCGACCGATTGAAAGAGAATATTCTTCCATGGCCTCCAAGCGGATTCTAAAGGAACTCAAGGACCTCTAGAAAGACCCTCCAACCTCTTG
CAGTTCCGGTCCCGTAGCGGAACATATGTTTCATTGGCAAGCAACTAAAATGGATCCCCCTTATAGCCCTTATGTTGGGGGTGTTTTTCTAGTTACTATT
CATTTTCCTCCAGATTATCCATTCAAGCCACCCAAGGTATTGGCCTAGTCTTGCCCAATACAATTTCAACTATTCTGCCTTCATTATATATACTTGGAGA
ATATTGAACTTCTTTTTGTATATATTGTTAAAATTTCTATTTTTCCTAAATTTCAGAAAATCCGTACAGTTTTTTATTTAGATTTTTTGGATTCTTATCT
TCAAAGATATTAAATTTTGCTTTTTTTAATCATCCAATGTTTTTGTTGTCATAAGACTAAAATTGGTGTCTATATAAGCTTTTCTTTTCACAACTACAAC
TGCATGTTGGGTCACAAGAGGGAAACTTTTGTATTGAAATGAGATTTTTGAAAGGATTTAAAATTGCATCAATATTGTAACTTGTCAAAGATAGGAAGCA
AGAACCAAGATGAGCAAGACTGCAAGAGGAGAAACTTTTTAGTTGATTTTGTTCAAGAACTGAGATGTGCCTAAAGTTTAAGATGAAAAATTCATTAGGA
AAATTTATGCATTGAAATCAAACTTTTGTCTTGAAATGAGACTTGTATTCTTATAATCTTATACCTTTTGTGCTATTTAATGATATTTGTAATGAGAATG
AGAATTTTTATTAACTTGAGATTCTTCTTGTCTTTAAA