Detailed information on CNT0000700 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000700

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00.2230.2283.64400001.6321.3052.131.0342.2323.0472.464leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)012340.250.50.751.251.51.752.252.52.753.253.53.75

Peptides detected in this lncRNA

>peptide 1 (39 aa)
NPKNTFALCSHSPLSVSFAFTLSPSSSPHTLSYPPLFFR*

>peptide 2 (34 aa)
MTKFAKRSYQLSLRCVHQLFPAFTCTGSVCFNHI*

Sequence

>CNT0000700
AAATCCTAAAAACACATTCGCGCTCTGCTCTCACTCCCCTCTCTCAGTGAGCTTTGCTTTCACATTGTCTCCCTCATCGTCCCCGCACACCCTCTCGTAC
CCACCACTGTTCTTCCGCTGAGCAGCTGCCGCCATCTTCCTTCTTCCTCGCACTCCCTCCCTTGCGACATTGTCTTCTGCGAAGGGTAAAACGTTTTCCC
ACGCCACCGTCACTCAGTCACTCGCACAACCTCAAAAAGCTTTTCGCAGTCCCTCGCCGCAGTGAGCGCGCCAAACTCCAATGAAGGTCCTTGCCACTGT
TGAGATATGAGGTTTTTCAATTAGCCTTCCTTGGCAGGGTCTGCAAGCTGTCACCAAAAAGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACT
CTCATTGAGGTGTGTTCATCAATTATTTCCTGCTTTTACCTGTACTGGTTCGGTTTGCTTTAATCATATATGAACAATTTTATGGTGAATTTATGGTCCA
AAAACAATAGAAACTAGAATGGAGTTCGATTGGTG