Detailed information on CNT0000719 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9M0C3|ATL14_ARATH, E-value = 2e-22

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000719

Peptides detected in this lncRNA

>peptide 1 (202 aa)
MNNPLPTDYRILDLHAVVSHHSITMPSPSADQSQSQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLGGAFHRLRFRPSVTSAPASSIGL
PPRDINNLPRFLLAKGSANRPDSHCVVCLDAFRNAQWCRKLAACGHVFHRTCVDTWLLKVAACPTCRTPVRFNAGTTVHDPPQRSDQFHTCGTDCTALTT
LL*

>peptide 2 (29 aa)
MIYRGRVTKKEIWNGYRGSDGQGPESRTE*

>peptide 3 (42 aa)
MPELRFMTRLSVLTNFIPAELTALLSPPFYSFDHNNAIIGTA*

Sequence

>CNT0000719
ATATGATTTATTATTATATGACTAAAGGAATGGTTGGCAAGTGATGATATATAGAGGGAGAGTAACGAAGAAAGAAATTTGGAACGGATACAGAGGCAGC
GACGGTCAAGGTCCAGAATCCAGAACCGAATGAATAACCCACTGCCCACAGATTATAGAATTTTGGACTTGCACGCCGTCGTCTCCCACCACTCAATCAC
CATGCCTTCTCCTTCTGCAGATCAATCACAATCCCAACCAAAACCTAACCCCAACCTCCTTTCCCTCTTCCTCAAGCCCATCATCATGCTCCTTCTCACC
TCCCTCTTCTTCCTCTTCCTCGGCTTCGCCGCCTTCCTCCTCCTCAACCTCTTCCTCCTCGGTGGCGCCTTCCACCGCCTTCGCTTCCGCCCCTCCGTTA
CCTCCGCCCCCGCCTCCTCCATCGGCCTCCCCCCTCGTGATATCAACAACCTCCCCCGCTTTCTGCTCGCCAAAGGATCCGCAAACCGACCCGACTCCCA
TTGCGTCGTCTGCTTGGACGCCTTCCGCAACGCCCAGTGGTGCCGAAAGCTCGCCGCTTGCGGCCACGTGTTTCACCGCACGTGTGTCGACACGTGGCTC
CTCAAGGTCGCCGCATGCCCCACGTGCCGTACACCCGTGCGATTTAATGCCGGAACTACGGTTCATGACCCGCCTCAGCGTTCTGACCAATTTCATACCT
GCGGAACTGACTGCACTGCTCTCACCACCCTTTTATAGCTTCGACCACAACAATGCAATTATTGGTACGGCATGATGCGCAGCTGAGAATCATCCTTTGA
TCTCTGGATGTGACCCATTGGAAGATGGCAGGCATATATTGCTTGATTAATTGGCTTGAGGAGTTTAGGTAAAACTTTTTTCGTTGGATTATTATTATGA
TGGAGCAAGTCCTGCTGTAATTTGGCCTTGGACACAGTCACGAGAAGTTGCTAAGAGGTCAACATGCAACACCAGAGAGAACTCGCACATCAATTTGTAG
ATGGTTGGTTCCGCTCCGTTCCGTAAGGTTTATTTGTTACTAGTCGTTGAATTGCAAAACAACTAATTTACCATCCCCGCTCCCCCCCAAAAAAAATAAA
AATTAACAAAAGACAAAACAAACTTGTGTTTTTGGTGGTCGGTATCCATTCCATGGAACTTCTTCCTAATTGTTTTTGTTAGTATGTTTCATGGTAAAAC
AGGACTACGGCGTAGGTTTTTCATCTTATATAAAAC