Detailed information on CNT0000723 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000723

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)000228.91.610.4490.1760.3310.8416.0247.1934.8893.769156.444111.931leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)020406080100120140160180200220240260

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LNFSYHSSLFQLPPCHPIFTSNHVVLAMTFFY*

>peptide 2 (41 aa)
MRKPSSSGCINWWSIIAGRIPGRTAEEIEKYWTSRFSGSSE*

>peptide 3 (69 aa)
MADSDLSSSQISTHSTDSGNRGSSKVEFSEDEETLIIRMYKLVVYNCWKDSWKNSRGNREVLDFKILGL*

>peptide 4 (36 aa)
QFQLPFFSVSTPSLPPNLHEQPCCPSNDLLLLIPPK*

Sequence

>CNT0000723
CTCAATTTCAGCTACCATTCTTCTCTGTTTCAACTCCCTCCCTGCCACCCAATCTTCACGAGCAACCATGTTGTCCTAGCAATGACCTTCTTCTATTAAT
ACCACCCAAATAACCTTGTCTTCAAACACACTTAATTCTCCACGCCTCCTTGCAATGGCTGACTCGGATCTCTCTTCAAGTCAAATTTCTACACATTCTA
CTGATTCAGGAAATCGAGGGTCTTCCAAAGTTGAATTTTCTGAAGATGAGGAAACCCTCATCATCAGGATGTATAAACTGGTGGTCTATAATTGCTGGAA
GGATTCCTGGAAGAACAGCAGAGGAAATAGAGAAGTATTGGACTTCAAGATTCTCGGGCTCTAGTGAATGAAGCTCCGGAGTACTACGATTGGTGTTCAG
TCTAGGACGAGCAAGAAGATTTTGGGTGCAAGATTAGTGTGATTTTGTGGGACATAAAAACTGAATTAAAGTTGGCATAGTTTATAGGTATTTGTATTGG
CTATAAAAAAAGAAGTGGGGCAGCAACTATAGAAGCTGGTTTGTGTTATATTTCTCCATCTTGAAATGTTCCTTGGTGTGATATTTTCCATCTTGAAATG
TTCCTTGGTGATTGGTCTTTTCTGAATTGTACTTAGTGCTGTTCATCTTCGTGTATCTTATTCATTTACCATTTTGGCTTTTTATCTTGCGTCTGAAATC
TGTATTGGAAATGAGAATTAATTAGAGACAGGTTCAGTATTGTCATTCTTAGTTTAATTACGTATATAGGACCAAAAAAGACAATAATACAG