Detailed information on CNT0000758 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8GXX0|ERV1_ARATH, E-value = 6e-34

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007287, E-value = 3e-06 (V. vinifera)

Expression of CNT0000758

Peptides detected in this lncRNA

>peptide 1 (33 aa)
FSIGDNKIFPNLRKKIERNSIDNLRRHRFFFSR*

>peptide 2 (101 aa)
MPENPLQTLFHNIEQVSSFVQHHLSNFIGLHHHPSSGPLLSISSSTKGPLSKTATSVQLADTAVKEKSAAPVTKEELGRATWTFLHILAAQSKSCTDWIT
C*

>peptide 3 (74 aa)
MLNFLSGYVMCIMLLIEALPNRYSPVNELMQGGANWTVNRMHVKLLEVHQFLGGYGRNLRKNDCHTYYVRCVKF*

>peptide 4 (80 aa)
MSRTLLVVFPVESSEFRYSLRVFRNLFGILKSQLKTLAIEFGHGSSPTLSQVTCLRIHCRPCSITLNKSQALFNTISLIS*

Sequence

>CNT0000758
TTTTTTCAATAGGGGACAACAAAATTTTCCCAAATTTGAGAAAAAAAATAGAAAGAAATTCTATAGACAACCTTAGACGACACCGTTTTTTTTTTTCTCG
ATGAGTCGGACTTTGCTTGTTGTTTTCCCCGTTGAGAGTTCAGAATTCAGATATTCCCTTCGTGTGTTTCGTAACTTATTCGGTATCCTTAAATCGCAAC
TCAAAACCCTAGCCATTGAATTTGGGCACGGATCTTCTCCCACGCTATCTCAGGTAACATGCCTGAGAATCCACTGCAGACCTTGTTCCATAACATTGAA
CAAGTCTCAAGCTTTGTTCAACACCATCTCTCTAATTTCATAGGCCTTCATCACCACCCATCTTCAGGACCCCTCTTGTCCATCTCTTCCTCCACCAAAG
GCCCACTTTCAAAAACTGCAACTTCTGTACAACTCGCTGATACTGCTGTCAAGGAAAAGTCTGCTGCCCCAGTGACTAAGGAAGAGCTTGGAAGGGCTAC
TTGGACTTTCCTTCACATTCTTGCAGCTCAGAGCAAATCCTGTACTGACTGGATCACATGCTGAATTTTCTCAGTGGCTATGTCATGTGCATAATGTTGT
TAATAGAAGCCTTGCCAAACCGATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGAAGT
ACATCAATTTTTGGGAGGATATGGCAGAAATCTACGTAAAAATGATTGCCACACATACTATGTGAGATGTGTTAAATTTTGACCTTTAGAAAAATGGTTT
AGATAGGCCAAGGGTTATTTGATGGCATTACACCGGAGTACGTGAATACATATTCATAACTCGAATTATTTTAGAAAATTAATAGTTAAGCCCGGTTTAT
ATTGATTTTTTGAGCATCACAATCAGAGATGTAGTTGCCAGAGCTTGTCAATTCTTTACAAGAATTATTCTATGTGCTCGTGCGTTGTGTAATATTTTAA
TCCCTTTGTAACTGATTTCGTTAATAGGAATATTGTTTCCTTACATCCCGACCGGATGACATAATGATTAGACATTGTGTGCTCACACGTTGTGGGATGA
TTCATAAATAGCGAAAAAATCTTGTGTTTTATTCCGTCGTGTGTGAAAATCCTTTGGGTTAGTGGCAGTTACAGTATCGCGAAAG