Detailed information on CNT0000801 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q41228|PSAEA_NICSY, E-value = 4e-14

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0010879, E-value = 6e-08 (S. tuberosum)

Expression of CNT0000801

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)000.334000000000000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.10.20.30.0250.050.0750.1250.150.1750.2250.250.2750.3250.350.375

Sequence

>CNT0000801
CTGGAGAAAGAATGTAGTTCATAGAGAATAGAAATCAAGGGGATAGATATCAGAGAGAATATGATACAGATTCTTTTTTTTTTTTGTCGCATGAAAAAAA
CTTAGGCTAGTAACTGCGATAGCATGACCAGAATCAAAATTACAAATAAATTGGACTCATTCCACTTCCACGATCTCATCCAAAGCATAGTTGTTTGTTG
ATACATTGGCTAGTAACTGCGATAGCATGACAAGTATCAAAATTACAAATAAATTGGACTCATTCCACTTCCACGATCTCATCCAAAGCATAGTTGTTTG
TTGATACATTGGCATAGTTGACTTTGTTGAATCGGACCACAACAGGGTAGCGAGTGTTGGGGTCC