Detailed information on CNT0000924 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8VYD9|CAF1M_ARATH, E-value = 2e-32

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000924

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MNKLWFGGERIMSPGRMDTFLKIENQLTTLVACVWEKSNRLCNTTISTAN*

>peptide 2 (34 aa)
MLLLSNLLLDGVFTSISYKTRVRCLQNNLAQGPF*

>peptide 3 (39 aa)
APTSFSISMRFSSSSSCNSFLHNSTIHSFILLLSLTAWK*

>peptide 4 (52 aa)
MLWKPHEPVYPRLIKTTINGLSIKETKEIWKRGLAVPALTKFGHGALYSGDF*

>peptide 5 (52 aa)
MVPCILVTFENEQIVVWRGKDYEPRKDGYFLKDRESVDDIGGLCVGKEQQAM*

>peptide 6 (34 aa)
LPLPSLYQCAFLLLLPAIPFFTTPQFIHSFFFCL*

>peptide 7 (55 aa)
MKRRGLHSSMESQPRLLPTFCSASIHTVCSAATNVVPALITSFTLIHAPYYFHFT*

>peptide 8 (96 aa)
SHFLLYINALFFFFFLQFLSSQLHNSFIHSSSVSNGVEMMGIVKGLSRNNAHWYGGGGGDSGWSLGQKKRRRPLSLAEQLHGDTRNFFYNKEKGVV*

>peptide 9 (30 aa)
MDKNNLKVKGKIVLLVPHFTSNFAIGLLVI*

Sequence

>CNT0000924
GCTCCCACTTCCTTCTCTATATCAATGCGCTTTTCTTCTTCTTCTTCCTGCAATTCCTTTCTTCACAACTCCACAATTCATTCATTCATTCTTCTTCTGT
CTCTAACGGCGTGGAAATGATGGGAATAGTAAAAGGTTTGAGCAGGAACAACGCACATTGGTATGGCGGCGGCGGCGGCGACAGTGGGTGGAGTCTAGGG
CAAAAAAAGCGAAGAAGGCCCCTGTCCCTTGCGGAGCAATTGCACGGCGACACTCGCAACTTCTTCTACAACAAAGAGAAAGGGGTTGTATGAAAAGGCG
TGGGTTGCATTCTAGTATGGAATCACAACCTAGACTTCTCCCCACATTCTGTTCTGCTTCAATCCACACTGTCTGTTCCGCCGCCACCAATGTTGTTCCT
GCTTTGATTACATCCTTCACACTGATCCACGCCCCCTATTATTTCCACTTTACTTGATATTCACTAACCTATCATACATATTTATATTCACTTTGGTTTT
ATTGTTGATAGTTCTTGTGTGTTTGATGTTTAGACGTTGGTGCCTTGGTGGGCATTAATTAGGGTAGTAATAAGATACTTATCTATCTATTTTGATTTGT
CTGCAAAAAATAAATGCTTTTGTTGTCAAATTTGTTGCTGGATGGTGTTTTTACCTCAATTTCATACAAGACCAGAGTGAGGTGCTTGCAAAATAACCTT
GCTCAAGGCCCCTTTTGATAGAATATTTGTGCTAAGTAAGTAGAGATCTGATAAGTTTTTCTTAGTTGTATTAGAGCATCTTTAGTTGAAGATCTTTAGG
TGAAGATCCGGTCTTGTCCACATATATTATACAGAGGCAGGAATTATAATCCGAAAAAGAGGCCTGTAATACCTGTCATGTTGTGGAAGCCCCATGAACC
TGTATATCCCCGACTGATTAAGACAACAATTAATGGCTTAAGTATTAAGGAAACGAAAGAAATTTGGAAGAGAGGACTAGCTGTTCCTGCTTTAACAAAA
TTTGGACATGGTGCCCTGTATTCTGGTGACTTTTGAGAATGAACAAATTGTGGTTTGGAGGGGAAAGGATTATGAGCCCCGGAAGGATGGATACTTTCTT
AAAGATCGAGAATCAGTTGACGACATTGGTGGCTTGTGTGTGGGAAAAGAGCAACAGGCTATGTAACACCACAATCAGCACAGCTAATTAGGAATCAATT
CATGGTTTTGCTGACAGCCAAGCTTGGAAGAGACTTTGGTAATTCATGATGTCAGAGAATAATGGAGGAAACTCAGTTCAATAGTTCAGTACGCAAGTTT
GTCACCATTACAAAATTGCCAGTTTGATATGAAGAGCTAAATGTACAAATCAGTGTTTTTTTACTGTTCATGTTTGGGTTAGTTTAGTTTTAGAATTACT
TATTTGAAAACCTATTTTGTAAGGTTTTGTTAACACAATGAGTGAAGGTTACTGCTGAATCATATGAAACGAAAATGGACAAAAACAACTTAAAAGTAAA
AGGCAAAATTGTACTTTTGGTCCCTCACTTTACCTCCAATTTCGCAATTGGTCTTCTAGTAATTTAATTCATAAATTTGGTTTTCCTGTTTTATAAAATC
CAGCAATGTTGGTCCCGAAC