Detailed information on CNT0000945 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q0WKY2|CCR4E_ARATH, E-value = 1e-55

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0000945

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MDVLYFGKTIYSSFCFKKIYSFKDLVCVTMLLSFVFLRQTMKKKNLTHVT*

>peptide 2 (30 aa)
MVRRKRGRPPPENSPSKRRRRRSPLECCKR*

>peptide 3 (43 aa)
MIAEKCQDSLKSRPTESSDHRLVMMLGCFLVFAKSFFFSYYLL*

>peptide 4 (60 aa)
MRNNVAQLCVFEANHEKKESDACNLTSIAPSTGKRRFVVGNIHVLFNPNRGDIKLGQTFT*

>peptide 5 (50 aa)
EPEQLWCGASVGGLHRKILRPNGEEDVLRWNVVRDRFSLPKTLPIARSVF*

>peptide 6 (33 aa)
LNRSNYGAAQAWEASTGKFSVQTEKKTFSVGML*

>peptide 7 (47 aa)
MCCSTQIVVTSNWARLLLDKAYKLSQEWGDIPVIIAGDLNSVPQCHI*

Sequence

>CNT0000945
TTGAACCGGAGCAACTATGGTGCGGCGCAAGCGTGGGAGGCCTCCACCGGAAAATTCTCCGTCCAAACGGAGAAGAAGACGTTCTCCGTTGGAATGTTGT
AAGAGATAGGTTTTCTCTTCCAAAGACTCTTCCAATTGCACGATCTGTATTCTAACATTCCACATAGTTTCTTGGAGTGGGAAAGGTGGAAAAGGCTCAT
ACTTGAAGAGATTAATAACTATAATGCCAGCATACTGTGTTTCCAGGAGGTTGTTCATTTTAATGATCTAGATGATCTTTTCCAGAACAGTGGCTTTAAA
GGTGTTTACAAGGCTCGCACAGGAGAAGCACTAGATGGATGTGCTGTATTTTGGAAAGACAATTTATTCAAGCTTTTGCTTCAAGAAGATATATAGTTTC
AAAGATTTGGTATGCGTAACAATGTTGCTCAGCTTTGTGTTTTTGAGGCAAACCATGAAAAAAAAGAATCTGACGCATGTAACCTAACATCAATAGCACC
ATCCACCGGAAAAAGAAGATTTGTAGTAGGAAATATACATGTGTTGTTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGACTTTTACTTGATAAAGC
ATACAAGTTGTCACAAGAATGGGGCGACATTCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGTGCCATATATAAATTTCTGTCTTCATCAAA
GATAATGGGCTGAACAAAAAGGAATGAGGGAAAGGGGAACAAATTCCCTTGTTTGGGAGTTTGAAAATAGGTAGGATGTAAAAGGAATTCAAGAGCATCT
ATTCACCCTTTGTTCCTTTCAAAAACTCAATGTTTGTTACCCTGAAAATTGGTTGGAACTGGAGGAAATCAAAGGTTTCTTGCCCTTAATAATCTTACGA
ACAAAGGGAAAGTTAGCTTTGTTCCACTCCTTACCCTGCCTGTCCAATTTATCCCTACTTGTCCCATTCCATTCTATTATCCAAACACTGTTAGAGGTGG
GGCTTGTTCTTTGAGGGGAGAAGGCCATTAATGAGTATTCAGTGTTTATAAGTATTGCTCCATTTATTGCAGTTAGACATCCAATTACATGATCGCAGAA
AAATGTCAGGACAGCTTGAAATCCAGACCAACAGAGTCTTCAGATCATAGATTGGTGATGATGCTAGGTTGTTTTTTAGTCTTTGCTAAGTCTTTTTTTT
TCAGTTACTATCTGTTATAACTTCCCCTCCCGCTCCTCCTAATGAGCAAGGCAACCATCAATTATGAAACAGATTCACAATCATTTATTTGCAAGACTGT
AGATTATTGTTGATTGTTGATATTTATAATATGCTTTTTTATTGCTCTAAATGATAGTGTGTGCTTGTTTTACTTGAATCTCACTTTTCAATGCACATTC
AACTGAACTCTACACTCAAGGAGGATTGATGCTCAACTTAACATGATGACAATTCAAACATGCC