Detailed information on CNT0001092 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SS48|SDP6_ARATH, E-value = 2e-45

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001092

Peptides detected in this lncRNA

>peptide 1 (115 aa)
LKDLGNLDYFLGIEVRPQPNGALILTQCSYIRDLLGKTKMDEANPISSPIVGGCKLTKSGMKIWVNDLPTVTLIWRQKWRTVLVMNIVNLLLISLLGELV
LLSLKLTQHERHCLV*

>peptide 2 (35 aa)
MLSSMMGNTVSFVPLPKSSIKLRNQRPCFSLPLCQ*

Sequence

>CNT0001092
ACTCAAAGACCTGGGGAATCTTGACTATTTTCTGGGAATTGAAGTTAGACCTCAGCCCAATGGTGCTCTTATTCTGACTCAGTGTAGTTACATTAGAGAT
TTATTGGGAAAAACAAAAATGGATGAGGCCAATCCCATTTCTTCTCCAATTGTTGGAGGCTGCAAGTTGACTAAGTCAGGAATGAAAATTTGGGTAAACG
ACTTGCCCACGGTTACCCTTATCTGGAGGCAGAAGTGGCGTACTGTGCTCGTAATGAATATTGTGAATCTGCTATTGATTTCATTGCTAGGAGAACTCGT
CTTGCTTTCCTTGAAACTAACGCAGCACGAAAGGCATTGCCTCGTGTGATTGAAATATTGGCAAATGAGCACAAGTGGGACAATTCAAAGCAGAAGGAAG
AGTTGGAGAAGGCTACAGAGTTTTTGAAGACTTTTAAATCCTCCAAAAATGCTCAGTTCCATGATGGGAAACACAGTTAGCTTTGTACCTCTGCCTAAGT
CATCAATCAAATTAAGGAATCAAAGGCCATGTTTTAGTTTACCACTTTGCCAATGATCTTTGTATTTTGTTTTTTTGCTTTTCCCTCCCACCCCAAGTAA
TTCTTTACATTTATTTGTTCTTTTAACATTACGGGTTTTACAGAATAGAATTCCCTTAACTGAAGCAGTTTCACCCAACACTAATATCACCCCAAGTAAT
TTTTTATCTTTTTGATATAAAATGTTTTCTTTGTTAA