Detailed information on CNT0001108 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q6DJH2|ADPPT_XENLA, E-value = 1e-11

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001108

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSCGVDIVSYDVPLGETITEFIQFFSSYFSSLEWDNIVNSGTSNDVLTEFYRPC*

>peptide 2 (40 aa)
MTEWRFWLFELGDRHCVSSESLPNISCYELQNNIEESGLY*

>peptide 3 (32 aa)
MINLVLDSQILISMYLIMVTVAIASEPVCLVG*

>peptide 4 (57 aa)
MGSGHIKVGPTSLSLLRSLPPSFPLALLDYQDYDKFGLRFPNFNFNVSHHGDCGHSI*

>peptide 5 (74 aa)
PNSVLLPSTRNIQMWRKKKILTETNHLSDIKLERTYVSVCAFRMGEGLRRWVVDISKWDQHHSHFFALSLLPSH*

Sequence

>CNT0001108
CCTAATTCTGTTCTGTTGCCATCCACACGCAACATACAAATGTGGCGGAAAAAAAAAATACTGACTGAGACGAACCACCTCTCTGATATAAAATTAGAAA
GAACCTATGTGTCTGTCTGTGCGTTCAGAATGGGAGAAGGCTTAAGGAGATGGGTAGTGGACATATCAAAGTGGGACCAACATCACTCTCACTTCTTCGC
TCTCTCCCTCCTTCCTTCCCACTAGCACTCCTCGATTACCAGGATTATGATAAATTTGGTCTTAGATTCCCAAATTTTAATTTCAATGTATCTCATCATG
GTGACTGTGGCCATAGCATCTGAACCTGTATGTCTTGTGGGGTAGACATTGTCTCCTATGATGTTCCACTGGGAGAAACAATTACAGAATTCATTCAATT
CTTCTCATCTTACTTTTCAAGTTTGGAATGGGATAACATAGTCAATTCAGGCACTTCGAATGATGTATTGACTGAATTTTACAGGCCATGCTGAAAGTCA
AAGGTGCATTTAGTTTCCAGGCATTGGAGCCTTAAAGAAGCATATGTTAAACCTATAGGGAGTGGACTTACTGAAGGGCTGAATAAAGTGGAATTTTCTC
ACACAAGATGGACAAATATATCAGCTAAAGTGGATGGGAAGGCTATGACAGAGTGGAGATTTTGGTTGTTCGAACTTGGGGATAGACATTGTGTTTCAAG
CGAGAGTTTACCCAATATCAGCTGCTACGAGTTACAAAACAACATTGAAGAAAGTGGACTTTACTGAAGAGGAATATACTCTAGGTCTTCATCTTCCAAA
CATAGTTGTTAAACTAGATGTAGACCAACATATTTCAATTTTACAAAAAGCATTTGATTTTTAGCCTAGAGGTTAGATGTTAGTGTAAATCTATGAAAAA
AATTGTAATGTGAAAGACAATAAGTATATCGAAAGAAAACACACACCTCCACTTTCTCAGTCAAAATAAGATTCTGTCTTGTTGGTCAATTTCTTAGAGT
CAACAAGGTTTTATACCGATCAACTTTTTTTTTATGATGGCCAAGGGCTAT