Detailed information on CNT0001190 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q6AUV1|XDH_ORYSJ, E-value = 2e-16

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001190

Peptides detected in this lncRNA

>peptide 1 (102 aa)
MVLSEAVSLLSPFFDEVTTVSAYFGEISWKGYLRLLLSFIIANGLHKITCRCSGSSLYRWNYFSYPWGCRNGARFAYQSCPNCCFSFSYPSLFNERSSNQ
SI*

>peptide 2 (79 aa)
MVCTKLLAGALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPLCSMKEVLINLFKVFIPNQDHTSSPIKTYMG*

>peptide 3 (49 aa)
KRCLLSLHHFFHANTTLTVTSLFTIPLFMWRHDGGRRTRSFLVRSFPHS*

>peptide 4 (106 aa)
ETLPPLTPSFLSRKHHTHCNFLVHDSIVHVEARRRATDAVFSGAIFPSLLSLLSPFSDTVFSGTVSLQSSLSLSWYCPRRFHFSHHFLTRSPLFLHISVR
YLGRDT*

Sequence

>CNT0001190
GGAAACGCTGCCTCCTCTCACTCCATCATTTCTTTCACGCAAACACCACACTCACTGTAACTTCCTTGTTCACGATTCCATTGTTCATGTGGAGGCACGA
CGGAGGGCGACGGACGCGGTCTTTTCTGGTGCGATCTTTCCCTCACTCCTGAGTCTTCTCTCTCCTTTTTCTGATACGGTCTTTTCTGGCACGGTCTCTC
TACAGTCTTCACTCTCCCTTTCATGGTATTGTCCGAGGCGGTTTCACTTCTCTCACCATTTTTTGACGAGGTCACCACTGTTTCTGCATATTTCGGTGAG
ATATCTTGGAAGGGATACTTAAGGCTGTTATTAAGCTTCATCATCGCCAATGGTTTGCACAAAATTACTTGCAGGTGCTCTGGTTCAAGTCTATACAGAT
GGAACTATTTTAGTTACCCATGGGGGTGTCGAAATGGGGCAAGGTTTGCATACCAAAGTTGCCCAAATTGCTGCTTCAGCTTTTCATATCCCTCTTTGTT
CAATGAAAGAAGTTCTAATCAATCTATTTAAAGTGTTCATACCCAATCAAGATCACACAAGTAGTCCAATTAAAACTTATATGGGATAGCAAATGGATAT
TTATTATTTACTTAAATGGCTAGTATACCTCACAGTCTCACACCTGATAAAATGACCTAAAAAATGATACTTTCAACTTCAAAAAAGATAGCTCAGCTTC
CTTCATGTATATGCATATCTTCTCTCTATACAATTTAACATTTCTCATCTCAATGAACATGCAGAACACGGTTTAGCTTCTACCATTATATTTTTTTAAG
TCAGCTTTTAATAAATAAATAAAGACTTC