Detailed information on CNT0001274 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001274

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)7.5056.6411.51901.8351.8443.7881.0150000000.213leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)012345678910111213

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MQSCKPRKHHPTSKPNLFLMTQQYSQVLALSLYLKLLLGHLFGDDNVRINVSRERHMT*

Sequence

>CNT0001274
CAAAAATATCATCCACAACAGCCCCGCCAAACTAGTGCATCAGCAATAGTTTAGTTCATTTCTTGTACTTCTTAGAATGGCTTTTATGGCCTTCAAAAAT
CAAAAACCGATTACACAAGAATATTAGAGGGTTCTTGTTACTTGCTCTATACCCTTGTTTTTATCGTTTGTTCAATTGCATGGAAGCTGAAGTATGAACA
TGGAACCTCGTGACTAAAGTATAGACACATATTGTCTCCATGAAACTGCTTGAGGGCCCAATAGGCTTTGTGCTCCAACTCCACCGATAGGTGGCATGCT
TTACCATAGACCAATTGAAATGGTGACAAGCCTATGGGAGTCTTGAATGCAATCCTGTAAGCCCAGAAAGCATCATCCAACTTCAAAGCCCAATCTTTTC
TTGATGACACAACAATATTCTCAAGTACTCGCTTTATCTCTTTATTTGAAACTTCTGCTTGGCCATTTGTTTGGGGATGATAATGTTAGAATTAATGTCT
CACGTGAGAGGCATATGACTTAGTAGAGACTAATAAATAAATAATTAATGATTAAGGACTAAATTGTAATTGGGCTTTCATTGTTTGTGAGAATCATAGG
TTTCAAGATCCTGTTATTTCCTATAATTGATAGTCTAGGATACCTCTTAAGAATTTTTACATGTGGTATCAGAGCATGTGCTATGAAATTTATAATTCTC
CAAGAATGATTTAATTTTTCTATGAACCCTAATTATGAAATTTAGGAATGATTTAATTTCTCTCAATTATGC