Detailed information on CNT0001308 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0001308

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (48 aa)
QPTSEIVLLVQVYLYFFSPLLFFLSPLRPTLNFWQIIVRQISSFLNCD*

Sequence

>CNT0001308
CAACCTACCAGTGAGATAGTACTGTTAGTACAAGTTTACCTTTACTTTTTCTCCCCCCTCCTTTTTTTTCTCTCCCCTCTACGTCCTACCCTCAACTTTT
GGCAAATTATTGTACGACAAATTTCTTCCTTCCTAAATTGCGACTGAAATTTCAACTAGATGAAGAAAATGTTGAGGTACCTGCAAGAAAAAATAACGTT
GGTGGTGCCGTAGTGTGTCAATTGAAGAAGAAGAAGAAGATGATGATGATGAGGACTTTGGGGGTGCCGTTGTGTG

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA09G05886.1 Uncharacterized protein protein coding CNT0001308 524 215 UTR5 Cis