Detailed information on CNT0001321 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O22860|RL38_ARATH, E-value = 7e-37

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0022119, E-value = 5e-24 (A. trichopoda)
CNT0027917, E-value = 6e-14 (O. sativa)
CNT0007870, E-value = 8e-26 (S. tuberosum)

Expression of CNT0001321

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LFHFSCVLWFMAFLYHPRHDPKGCSKRQPCITSAWMCR*

>peptide 2 (54 aa)
MPNSRFGLKLVQFYGSNDRIIGLISLAKVDIMLRLGWTRMELYKVAHYFESVAK*

>peptide 3 (30 aa)
MRLFLFLLPDALDFVAWFYMLVIFTRTFLF*

>peptide 4 (30 aa)
SSIFLAYSGLWHFSITHDMIQKVVANGNLV*

>peptide 5 (30 aa)
MLLQNPIVPGKRLCLTVEIPLLHELNIVSW*

>peptide 6 (39 aa)
MVKVYQQIVLYFHGISMISLMVPTTLCIKEILLPWSSLL*

>peptide 7 (76 aa)
MDVSLAVSTIIDFIYTKKIFFHNLIDNTNAATARNIFFLSKKFKKEGNYFITFGPLKEGHDSLGSGISPNRVPEYD*

>peptide 8 (69 aa)
MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL*

Sequence

>CNT0001321
CTCTTCCATTTTTCTTGCGTACTCTGGTTTATGGCATTTCTCTATCACCCACGACATGATCCAAAAGGTTGTAGCAAACGGCAACCTTGTATAACAAGTG
CATGGATGTGTCGTTAGCTGTTTCCACCATAATTGATTTTATATATACAAAGAAGATTTTTTTTCACAACCTTATTGACAATACCAACGCTGCGACTGCG
AGGAATATATTTTTTTTGTCTAAAAAATTTAAAAAAGAAGGAAATTACTTTATCACATTTGGGCCATTGAAAGAGGGCCACGATAGTTTGGGCTCGGGGA
TCAGCCCAAACCGGGTACCCGAATACGACTAGGGTTTATGTAAGAGAAATCGGGACACCACCGTCTACATATTGAAGAAGTGCCCAAGGAAGCTCGTTCT
TTCGTCGTCGTCACAAGTCACAACTCGCAAACCACAATGCCTAAGCAGATCCACGAGATTAAGGATTTTCTTCTGACGGCGCGGAGGAAGGATGCGAGGT
CGGTGAAAATCAAGAGGAGCAGGGATGTCGTTAAGTTTAAGGTTCGATGCTCCAAGTACTTGTACACGCTTTGTGTCTTTGACCCTGAGAAAGCCGATAA
GTTGAAGCAATCTCTTCCTCCCGGTTTGAGTGTTCAAGACCTGTAGAGCTGTTGAGTGTGGCAGCATGCGTTTGTTTCTCTTTTTGTTACCTGATGCTCT
AGATTTTGTGGCTTGGTTTTATATGTTGGTGATTTTTACGAGGACATTTTTGTTTTAAATTGGTACGAAATGTGAAAGTTTGATATTGAGCACAATTGAA
ATGAATTGCCCATAGTGGTTTATTTTATTTATTTTGATGAGTACTGTGGTTAGCCGTTTGCCTAGATAGAGCAACAGGATGCCAAATTCGCGATTTGGCT
TAAAACTCGTACAATTTTATGGTTCCAACGATAGGATAATCGGGTTAATTTCGCTTGCTAAGGTAGATATTATGCTCAGACTAGGTTGGACTCGCATGGA
ATTGTATAAAGTTGCACATTATTTTGAGTCTGTGGCCAAGTGAATGCTTCTACAAAATCCAATTGTGCCTGGAAAACGGCTATGTTTAACTGTTGAAATT
CCACTACTGCACGAACTCAACATAGTTTCATGGTAAAGGTATATCAGCAAATAGTTCTATATTTTCATGGTATCTCCATGATTTCATTAATGGTACCCAC
AACTCTTTGCATCAAAGAAATCCTCCTGCCTTGGTCATCACTGCTGTAAAAATGTAGGCACACTCTTCTCGTACTTTATTCTTAGTTAAACACTTGTGTC
ATAAATTCTCGTATTATAAACTGTTTCTTC