Detailed information on CNT0001420 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O81845|PUMP1_ARATH, E-value = 7e-50

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001420

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLTSCIFLLNKESGSLSNTRCGEFYFYTKVLWQSQLLIQLI*

>peptide 2 (35 aa)
MDIGFCWFHARSQIILDFGIITVLLPLICKSIIQRR

>peptide 3 (88 aa)
MDNVYTHLLAGLGAGLFAVFIGSPVDVVKSRMMGDSTYKSTFECFLKTLLNEGFLAFYKGFLPNFSRVGAWNVIMFLTLEQAKRVIRG*

>peptide 4 (35 aa)
MNTLEYSLLLHSNIMGSIAIFEWILDFVGSMRDPR*

Sequence

>CNT0001420
GGGAAATGCTAATAGAGAAGGAAATTAAAAAGGGAATTAATTAGATTTGTCTTCCTTTCAACAAAAACAATTAAATGCTCACAAGTTGTATTTTTCTTCT
AAATAAAGAGAGTGGTTCCTTATCCAATACAAGGTGTGGAGAATTCTACTTCTACACAAAGGTGCTTTGGCAATCACAATTGCTAATCCAACTGATCTAG
TCAAAGTTAGGCTTCAAGCTGAAGGTCAATTGCCAACTGGGGTACCTAAGCGTTATTCTGGTGCTATAGATGCATATTTAACTATACTGAGACAAGAAGG
GATAGGGGCCTTGTGGACAGGTCTTGGGGCCAATATAGCAAGGAATGCAATTATAAATGCTGCGGAATTGGCTAGCTATGATAAAGTGAAACGGGGTTCA
TGGACAATGTCTATACTCACCTACTCGCTGGCTTAGGTGCAGGTCTTTTTGCTGTCTTTATTGGTTCTCCTGTTGATGTGGTGAAATCCAGGATGATGGG
GGATTCAACCTACAAAAGCACATTTGAATGCTTTCTCAAGACTTTGCTTAATGAGGGATTTTTGGCCTTCTATAAAGGTTTCCTTCCTAATTTTAGTCGA
GTAGGAGCCTGGAATGTGATTATGTTTCTTACCCTTGAACAAGCAAAGAGAGTTATAAGAGGATAATTGTTGTTAGTTGTTACTCTTCATGATTGAGATT
CACCAAGCAAATTTAGTGTTCTTTTTCGGGTGAGTGCTACTGCTATCAGATGAACAACAGATTTGTTAGCAGAAAGGTGGTTTTTCTACATTTACTTCTG
CCGTGTGGATGGACGTCACGCTTCATATATTCTTAGTCGATGAATAAACCGTCAAATTACCATTGTCTCCTACTTGGGCCATGTGGACGCCACAATTAAA
ACATTCTTGGCTACAATGAATAGACCGTGAAATTACATTTACTTGAAAGGCATTCACTGTACTGGATCGATATGTAATGTATTTTTGGGAAATAAGTTGC
GTATTTCCCAACTCATTGAATAGACAAATGAAATGAAACATGTATGAATACTTTAGAGTATAGCTTATTACTTCATTCAAATATCATGGGGTCTATTGCC
ATTTTTGAATGGATATTGGATTTTGTTGGTTCCATGCGAGATCCCAGATAATCTTGGACTTTGGGATTATAACAGTTCTCCTTCCTCTCATTTGTAAGTC
AATAATTCAGAGAAGA