Detailed information on CNT0001502 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001502

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00001.0160.9570.250.2340.5221.8770.2270.7431.0700leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.10.20.30.40.50.60.70.80.911.11.21.31.41.51.61.71.81.92

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MLGSLYKHWLILFFFSPRMLDLILKHGRLGSLEFWKT*

>peptide 2 (77 aa)
MLLLIQKFSSAFGTSEDRSCTFNGPSNLHEGTNKITLLSVALVLKFGLDYPFALLECFNMYAWQFVQTLVDFVLFFP*

Sequence

>CNT0001502
TTAGGCTTCTAACTTCAGCTTTTTCGTCAGGTTAATTGTTAGCAGTAAAAGGAAGCAACACATGGGTACCACCATGAAGAGTTGGAGGTGTTCTTGTTGT
TTCTCATGCGTTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGCTCCGCTTTTGGGACAAGTGAAGACAGAAGTTGCACATT
TAATGGCCCTAGCAACCTACATGAAGGAACTAATAAAATAACACTTCTTAGTGTTGCTTTAGTACTCAAATTTGGACTTGATTACCCCTTTGCACTGCTT
GAATGTTTCAATATGTATGCTTGGCAGTTTGTACAAACATTGGTTGATTTTGTTCTTTTTTTCCCCTAGAATGTTGGATTTGATTTTGAAACATGGAAGG
CTGGGATCACTGGAGTTTTGGAAGACGTAAGAATAGAAATTATGTCAAAAAGTGAGTTTTTTTCTTAGACTGTTCGAAACTCAAGGTTGGTGATATTATT
CTTCGGAGTCCATATTCTTAGACTGTTCGAAACATATATACTTGGTTTTTTTGGTCCT