Detailed information on CNT0001677 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001677

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)3.6241.3571.7831.0570.2300.45300.2370.3780.2060.2250.3883.9761.608leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.250.50.7511.251.51.7522.252.52.7533.253.53.7544.25

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKDMLRHSDQKGTELKKAGESLYTFPMPDCMCRQAEPKSENGNTTKYMKL*

Sequence

>CNT0001677
GGAAGATAGAGCAATATTTAAGTGGTATTGGGAGACTAAGGAAAATTATATAGAGATTTAGGGATGGGAAGTATTCAAGCAGCAAATGAAAGACATGCTT
CGTCATAGTGATCAAAAGGGAACTGAATTAAAAAAGGCTGGTGAGTCTCTATATACTTTTCCCATGCCAGATTGTATGTGTAGACAGGCAGAACCCAAAA
GTGAAAACGGTAACACGACGAAATATATGAAGCTATAAATGTAGAGGAATCGTTTTTAGGAAATCAACTTGTTCAATACATGTAATTTATTTTGTAACAT
TATTATTTTTTATTTTCTAGTAAAAAGTAGCTGTGAATTCATAATTATTATTATTATTGTATATTGTACATGAGATTCATGGTAAACTGAGATAGACTTG
CACGTGATTATCATGATTCACTTTACTTTTGAACGATCGACAAACCTTGTGTGACAATTTAATTTATTAAGCCAAGATGTTCAATTTGCAAGTGATAAAT
AACATCAATTGGTTGTAATTTTATAGTCCAGAGGTTAGCTTGCAAGTTTAAAAATATTACTATTTATTTTGTATTGTATAATAAATACTTTTCATTGAAG
AAACCTTGTTCTTGT