Detailed information on CNT0001767 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LUD7|CALS8_ARATH, E-value = 3e-06

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0001767

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MQRLFNLIVRKFVVANVGPTGCIPSQKDINNAVLITNSCNSLSVTNLNMINSPKSHIHVNGFEGNIFYKTLWRS*

>peptide 2 (31 aa)
MWGLLGVYQARRTSIMQFLLPIPAILLVLPT*

>peptide 3 (29 aa)
LIHHFYFCLNLTQNISFHFSVSVFSFHEQ*

>peptide 4 (38 aa)
MSFLLHKFLRVSCICIVNALFLVLVSGALATVYSVITI*

>peptide 5 (57 aa)
MMRTFHFQERSSLLRRLDTFNDLEVTLRNSGDNHLEEPISITSLETFSLSYNVFSSP*

>peptide 6 (55 aa)
MSKLLQSDNDELLQSSSEMSTLLQISAFPLLVLEFPRHPITKFPASVRGCARLQL*

>peptide 7 (51 aa)
MKYPSIYPKYYFLLVNLIFQFPILILTGTYILVMWFSFSIFLFSSLLFTLF*

>peptide 8 (83 aa)
MLYFWFWFQVHWPLSIVLSPYNGQELVLDLLVSPPPYLAPFTIGPIVLKGVNYASGGGGIFVTIMISKLIVQLTIIFLSIIIL*

>peptide 9 (44 aa)
MMILLYIALVREVKSECLIQEKYSGKAFTSIIILIYFGNLSKLQ*

>peptide 10 (35 aa)
MKALQVISSDKQLFLKQDPNSHLLKYIQELEKNAV*

>peptide 11 (75 aa)
MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHACFTRKLIVDRTHGNKHVVGAALIKNKFEVLSNLDKNMKAILLD*

>peptide 12 (37 aa)
MSHMVIFFFFFSLPSVIPILVITRCYTLCYNGQIKKT*

>peptide 13 (80 aa)
SYTIFISALTSLKIYLSTFLFPSSPSTSNRDSDEFLQSAAICQSSSRVTTTSSSRAAVRCQRSFRFRRSLFWFWSSLDIQ*

>peptide 14 (36 aa)
MLDTGKIQWKSIHKHYNTYLFWKSFQVTMIPTNHNS*

Sequence

>CNT0001767
TCTCATACACCATTTTTATTTCTGCCTTAACCTCACTCAAAATATATCTTTCCACTTTTCTGTTTCCGTCTTCTCCTTCCACGAGCAATAGGGACAGCGA
CGAGTTCCTCCAGAGCGCAGCGATATGTCAAAGCTCCTCCAGAGTGACAACGACGAGCTCCTCCAGAGCAGCAGTGAGATGTCAACGCTCCTTCAGATTT
CGGCGTTCCCTCTTCTGGTTCTGGAGTTCCCTCGACATCCAATAACAAAGTTTCCGGCGTCTGTTCGAGGTTGTGCAAGATTACAGCTGTGAAGAGTTTG
TATGAACATAGGCAACATAAGGTTCATATTACCTTATTAGCATCCCTAGAAAAGGGAAATAAGGAAAAACGGAAGTGAACTGCACCAACCGATCATTATG
GCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGACTTTCGTCATGCCTGCTTTA
CTCGAAAGTTGATCGTGGATAGGACGCATGGCAACAAGCATGTTGTTGGTGCTGCACTTATCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATAAGAA
TATGAAGGCAATTTTGTTAGATTGAATGGGAAAGATCTGCCTGAAGATGGACAATTCCTGAGCTCACGTGAACTCATGAAAGCACTTCAGGTTATAAGTT
CAGATAAGCAATTGTTTCTTAAACAAGACCCAAATTCACACTTATTGAAATACATTCAGGAGTTGGAAAAGAATGCAGTTTAGTTGTCAGAGGTGGCAAA
GAGTGCACATATGGTAAATAAAGTTGTGCTTTAGTTTGCAAGATTGAAGTGAAGACACAGTGAATATGTGGCTGTGTGCTACCAAAAGATGATGATCTTG
TTATATATTGCATTGGTGAGAGAAGTGAAGTCGGAATGCTTGATACAGGAAAAATACAGTGGAAAAGCATTCACAAGCATTATAATACTTATCTATTTTG
GAAATCTTTCCAAGTTACAATGATTCCCACTAATCATAACTCGTAAGATCTTGTGTAATTAAAATGGAAATAGGAGACATTTTTTCAAATCAAACTCCCC
CTTGTGTATCTGTATTGTATTTATGATCTTGTGTGCTGAAAAAACGCTTTTGCAAAATAGAAGTCTTTGTTTTGAACTTCCTGAGTTTTGGTAGTTTGAT
GATTTATTCATTGGAAGAAAATGTTCAGCTGATTTGATAAAGGAAATGTAATTGTATGAGTAAACCCTCAAATTAGTCCTTAAGATTGTATCCATCAATC
ACTTTAGTCCCTTTTGTTCCTTTTTAAAATTTACTCCCAACTTTTGTAAAAGGGCACTCTCCTTAGTCTTTAGTCCTTTTCTATCTCATTTTTGACTGAC
ATTAAGGATTACAATGAATGACTACAAAGTCGGACTAAATAAGAATCTTAAAAAGTCAGACTAAAGTGACTAACTCCAAAAACTAATTTAGGGGTTTACC
CATACTTGTACAGATGCATATCAAAGACTAGTTTTCTTCTTGCTTGCAGAAATCAATTCCCAATAAGGTACACTTCATAAACACCCTTTTTCTTGGCTTA
TACTCATTGTATTATAATATAATATTCATGATCACACAGGGTGACTTCTTAGTACATTTAATGGATATTGCATGAGATGAACTGACTAAAAAGCATGATG
AAGTTTCAGTTGAGAAGCTGCAGGTATAGTAATGAAATATCCTTCAATTTACCCTAAATATTATTTTCTCCTAGTAAATTTAATTTTTCAATTTCCTATT
TTAATTTTGACAGGGACCTATATTCTAGTTATGTGGTTTTCCTTTTCTATTTTCTTGTTTTCCTCTTTGTTGTTTACTCTCTTCTAGACCTTGCATTACC
ACAACCTGTTTTGTGATAAGTAACCAATTCAGCTTGTAAGAAACTCTCAGAGTTGTAAACTTCAGTATTCACACATGATGCGAACATTTCACTTTCAAGA
AAGATCTTCTCTACTTAGAAGGTTGGACACATTTAATGATCTTGAAGTTACTCTGAGAAATTCTGGTGACAATCATTTGGAGGAGCCTATTAGCATCACT
AGCCTTGAAACATTTTCACTAAGTTACAATGTCTTTTCTTCTCCATAAGTTTTTGAGAGTGTCTTGCATTTGCATCGTTAATGCTCTATTTTTGGTTCTG
GTTTCAGGTGCACTGGCCACTGTCTATAGTGTTATCACCATATAATGGTCAGGAATTGGTACTGGATCTACTGGTTTCACCCCCACCTTATTTGGCACCC
TTCACAATTGGACCAATAGTTCTGAAGGGTGTAAACTATGCCTCTGGTGGAGGTGGAATCTTTGTGACCATCATGATATCGAAACTCATAGTTCAGCTCA
CTATAATATTTCTCAGCATTATAATTTTATAAAGTCCTTTGTTTTGTTTATAAATATTTCTCCTACAAATTTTGGTGTTATGGTTACTAACTTACTATTA
TATTAACATTCAACCACATGCAGAGGTTATTCAACCTCATAGTTAGAAAATTTGTTGTGGCAAATGTGGGGCCTACTGGGTGTATACCAAGCCAGAAGGA
CATCAATAATGCAGTTCTTATTACCAATTCCTGCAATTCTCTTAGTGTTACCAACCTGAACATGATTAATAGTCCAAAATCTCACATACACGTAAATGGT
TTTGAAGGAAATATATTCTATAAAACTTTATGGAGATCCTAAGCTTGGGAAGGAAAGCCTGAAAACCAAAACCATGCCATAGTTTTCACTCGTGGTGAAG
CTGTTCAAATTATTGACATGAATCAGGTGAAGATATGTCTCATATGGTCATTTTTTTTTTCTTTTTCTCTTTGCCATCTGTAATACCTATTTTGGTTATT
ACAAGGTGTTATACATTGTGCTACAATGGACAAATTAAAAAGACTTAAGGAAAAGGAAGG