Detailed information on CNT0001768 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LUD7|CALS8_ARATH, E-value = 3e-06

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0001768

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MWGLLGVYQARRTSIMQFLLPIPAILLVLPT*

>peptide 2 (35 aa)
MKALQVISSDKQLFLKQDPNSHLLKYIQELEKNAV*

>peptide 3 (38 aa)
MHEFRLETPHMPPKLLNPECKSSKQLKALVCKIEVKTQ*

>peptide 4 (75 aa)
MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHACFTRKLIVDRTHGNKHVVGAALIKNKFEVLSNLDKNMKAILLD*

>peptide 5 (44 aa)
MMILLYIALVREVKSECLIQEKYSGKAFTSIIILIYFGNLSKLQ*

>peptide 6 (80 aa)
SYTIFISALTSLKIYLSTFLFPSSPSTSNRDSDEFLQSAAICQSSSRVTTTSSSRAAVRCQRSFRFRRSLFWFWSSLDIQ*

>peptide 7 (127 aa)
MMKFQLRSCRLHPVVIPLFASFKSRSSCDVVLYCQHCINDSSHNHSRIKLSIPCVVNEKGNISLLLGQELVLDLLVSPPPYLAPFTIGPIVLKGVNYASG
GGGIFVTIMISKLIVQLTIIFLSIIIL*

>peptide 8 (55 aa)
MSKLLQSDNDELLQSSSEMSTLLQISAFPLLVLEFPRHPITKFPASVRGCARLQL*

>peptide 9 (57 aa)
MLDTGKIQWKSIHKHYNTYLFWKSFQVTMIPTNHNSCISKTSFLLACRNQFPIRVTS*

>peptide 10 (37 aa)
MSHMVIFFFFFSLPSVIPILVITRCYTLCYNGQIKKT*

>peptide 11 (74 aa)
MQRLFNLIVRKFVVANVGPTGCIPSQKDINNAVLITNSCNSLSVTNLNMINSPKSHIHVNGFEGNIFYKTLWRS*

>peptide 12 (29 aa)
LIHHFYFCLNLTQNISFHFSVSVFSFHEQ*

>peptide 13 (30 aa)
MLYMFIYDMVFSSMYSRFPKFRISDLLVIQ*

>peptide 14 (79 aa)
MVNKVVVNLWFLSSAFIYFQKLRLFFIELWHIWYIDLENRDNTKGGQLIILLCLVCQHSKQLVLLVLVHCKCPFYFLSI*

Sequence

>CNT0001768
TCTCATACACCATTTTTATTTCTGCCTTAACCTCACTCAAAATATATCTTTCCACTTTTCTGTTTCCGTCTTCTCCTTCCACGAGCAATAGGGACAGCGA
CGAGTTCCTCCAGAGCGCAGCGATATGTCAAAGCTCCTCCAGAGTGACAACGACGAGCTCCTCCAGAGCAGCAGTGAGATGTCAACGCTCCTTCAGATTT
CGGCGTTCCCTCTTCTGGTTCTGGAGTTCCCTCGACATCCAATAACAAAGTTTCCGGCGTCTGTTCGAGGTTGTGCAAGATTACAGCTGTGAAGAGTTTG
TATGAACATAGGCAACATAAGGTTCATATTACCTTATTAGCATCCCTAGAAAAGGGAAATAAGGAAAAACGGAAGTGAACTGCACCAACCGATCATTATG
GCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGACTTTCGTCATGCCTGCTTTA
CTCGAAAGTTGATCGTGGATAGGACGCATGGCAACAAGCATGTTGTTGGTGCTGCACTTATCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATAAGAA
TATGAAGGCAATTTTGTTAGATTGAATGGGAAAGATCTGCCTGAAGATGGACAATTCCTGAGCTCACGTGAACTCATGAAAGCACTTCAGGTTATAAGTT
CAGATAAGCAATTGTTTCTTAAACAAGACCCAAATTCACACTTATTGAAATACATTCAGGAGTTGGAAAAGAATGCAGTTTAGTTGTCAGAGGTGGCAAA
GAGTGCACATATGGTAAATAAAGTTGTGGTAAATCTTTGGTTCCTTTCATCTGCTTTCATTTATTTCCAAAAGTTAAGATTGTTTTTTATAGAATTGTGG
CACATATGGTATATTGATTTGGAAAATAGGGACAACACCAAAGGGGGACAACTAATAATATTGCTATGTCTGGTATGTCAGCATTCAAAACAATTGGTCT
TGCTAGTGTTGGTGCATTGTAAGTGTCCATTTTATTTCTTAAGCATTTGAAATTTATCCATTGTATACGATTAATTATATAGATAAATCTTAATTAACTT
GCATCTGAAAATTCATGCTATATATGTTCATATATGACATGGTCTTCTCATCCATGTATTCTAGATTTCCAAAATTCAGAATTTCAGACTTATTGGTGAT
TCAATAATATTCATATTTTAGGCATATTTTAGGTTACAAGATCCTGTTCAAGAAACAATGATGTAGTGGAGCCCATGATAAAGCCCCAGTGGTATGTCAA
TTGCAATGATTTGGCAAAACAAAATCTAGTAATTGATCGTTAGCATCATTATACTGTGTATGTAATTATTAATAATATTTTCCCTCGTTAAATATAAGAA
AAGCTATTTTTAATGCATGAAAGGACATACATCATGATCTTTCTTGCGTAGATTATTTAGTCCTCTTTTCATGCATGAGTTCCGCTTGGAGACCCCACAT
ATGCCTCCAAAGCTTTTAAATCCTGAATGTAAATCCTCAAAGCAACTGAAAGCTTTAGTTTGCAAGATTGAAGTGAAGACACAGTGAATATGTGGCTGTG
TGCTACCAAAAGATGATGATCTTGTTATATATTGCATTGGTGAGAGAAGTGAAGTCGGAATGCTTGATACAGGAAAAATACAGTGGAAAAGCATTCACAA
GCATTATAATACTTATCTATTTTGGAAATCTTTCCAAGTTACAATGATTCCCACTAATCATAACTCATGCATATCAAAGACTAGTTTTCTTCTTGCTTGC
AGAAATCAATTCCCAATAAGGGTGACTTCTTAGTACATTTAATGGATATTGCATGAGATGAACTGACTAAAAAGCATGATGAAGTTTCAGTTGAGAAGCT
GCAGGCTTCATCCTGTGGTGATTCCTCTGTTTGCTTCATTCAAGAGTAGATCCTCTTGTGATGTTGTCTTGTACTGTCAGCATTGCATTAATGATAGCTC
GCACAATCATAGTAGGATAAAGCTTTCCATACCATGCGTTGTCAATGAGAAGGGAAATATTAGTCTACTACTAGGTCAGGAATTGGTACTGGATCTACTG
GTTTCACCCCCACCTTATTTGGCACCCTTCACAATTGGACCAATAGTTCTGAAGGGTGTAAACTATGCCTCTGGTGGAGGTGGAATCTTTGTGACCATCA
TGATATCGAAACTCATAGTTCAGCTCACTATAATATTTCTCAGCATTATAATTTTATAAAGTCCTTTGTTTTGTTTATAAATATTTCTCCTACAAATTTT
GGTGTTATGGTTACTAACTTACTATTATATTAACATTCAACCACATGCAGAGGTTATTCAACCTCATAGTTAGAAAATTTGTTGTGGCAAATGTGGGGCC
TACTGGGTGTATACCAAGCCAGAAGGACATCAATAATGCAGTTCTTATTACCAATTCCTGCAATTCTCTTAGTGTTACCAACCTGAACATGATTAATAGT
CCAAAATCTCACATACACGTAAATGGTTTTGAAGGAAATATATTCTATAAAACTTTATGGAGATCCTAAGCTTGGGAAGGAAAGCCTGAAAACCAAAACC
ATGCCATAGTTTTCACTCGTGGTGAAGCTGTTCAAATTATTGACATGAATCAGGTGAAGATATGTCTCATATGGTCATTTTTTTTTTCTTTTTCTCTTTG
CCATCTGTAATACCTATTTTGGTTATTACAAGGTGTTATACATTGTGCTACAATGGACAAATTAAAAAGACTTAAGGAAAAGGAAGG