Detailed information on CNT0001773 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001773

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)9.95810.56812.2470.7028.27113.46620.92919.4840.6291.2580.6840.7470.6451.3222.494leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0246810121416182022

Peptides detected in this lncRNA

>peptide 1 (131 aa)
RKIYLILYLVDNNWLQTDKKYVYRNPPQPQLLLRSHHKPPSTETEAEPKSREESENGNYDWCEPFMPQGFLQRIRLTAKRACCKVLFYCILSSRFYDLTG
LQNGILKRGREIFLTGCYLRTPTGGLPEGNC*

>peptide 2 (77 aa)
MCTEILPSHSYSLDLIINPPLQKQKQNPRAEKNQRMATMTGVSLSCPRVFFNASGSPQNAHAVKFSFIVFCPADSMT*

Sequence

>CNT0001773
AGAAAAATATATCTTATACTGTACTTGGTAGACAACAATTGGTTGCAAACGGATAAGAAATATGTGTACAGAAATCCTCCCCAGCCACAGCTACTCCTTA
GATCTCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAACCCAAGAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCC
CCAGGGTTTTCTTCAACGCATCAGGCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCTTTTATTGTATTTTGTCCAGCAGATTCTATGACTTGACAGGA
CTGCAGAATGGAATTCTGAAGCGAGGGAGAGAGATTTTCCTCACTGGTTGCTACCTCCGAACTCCCACTGGAGGACTTCCAGAAGGAAATTGTTAAAGCA
GCAAAAACATTTACAGCTATAGGTTATAAGCATATTGAAACAGGAAATTTCTGTTCTGTCCCAATGTTGATGTCCATGCATTACTGAATATTATGGTTCC
TATCTCAATCAAACTAAATTTGGATAATAATGGAATACATGGCTGGTGGCTCAGTTGCTGATCTAGTAGGCAAAGGCTACTGGTGACAGAAATTCAAATG
CTTCAATGGAAGATAGTGCAGCAAATCTTGTTGAGGTACCATTTCTCTGTGATATAACTTGTAAGTTTCACTTGCATGTTGATTAATACAAGATGAGCCT
CCCCCCTTTCTTTTGTATAGATTTGGTTCCATGATGCTGTTGATTTATTTGTAGACCAATATTTTATTATTTTCCCTTGTTATATAGTTGCCTGAGTTAC
CCACCTAGTTTGTTTTGTAGGATATATTCTTAAACCATTTCCTATGCACTCGTGTCTAAATTTTTTCACTTTATGTTCATTTATAATTTATTATGAGACT
TGGCATGTTTGTGATTACTTCGGAT