Detailed information on CNT0001782 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001782

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.6860.27500000000.26900.6390.27600leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.050.10.150.20.250.30.350.40.450.50.550.60.650.70.75

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRFKYIGTEHGMVYVLMFNSEDRKITILPYYVPTNVISDVLHPLDLKV*

>peptide 2 (58 aa)
SSDNEIQVWDLKSKQIASALQWESIITSFSVIMAPVTCKILVQMIFYLHLHATCSKKT*

Sequence

>CNT0001782
CTCAAGTGATAATGAAATACAGGTTTGGGATTTGAAAAGCAAACAAATTGCTTCTGCCTTGCAGTGGGAATCCATCATAACTTCTTTCTCTGTTATTATG
GCACCAGTTACATGTAAAATACTTGTGCAGATGATTTTCTATCTGCATTTGCATGCTACTTGTTCAAAGAAAACATAGGTAAATGGGTATTTTACATTTT
TGCCCTCTTAATGAGATTCAAGTATATTGGAACTGAGCATGGGATGGTATATGTGTTGATGTTCAACTCTGAAGACAGAAAAATTACAATATTACCCTAT
TATGTTCCCACAAATGTTATATCTGATGTTCTACACCCACTTGACTTGAAAGTTTAAGCTGTTAGGGGATATGGTTTGCAGTAGGACAATGAGCCCCAGC
GTAAAATCAAATGCAATTTCAATGCACATTATA