Detailed information on CNT0001788 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LU21|PNSB3_ARATH, E-value = 1e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001788

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MASMNLFTTIFLVTDARNPAIYFPRRWRPNTVPFAASSPASPPEIELEFVGVSSN*

>peptide 2 (49 aa)
MKEQTLNSDILRRNPNLGGWLVKLLSETKKTLARLLFKGFLSGRSNRPC*

>peptide 3 (29 aa)
MNEKCEIVVCCCKPKAGSEGSYPWRKRKQ*

>peptide 4 (41 aa)
MLDNKIELYATYGKLMNCGGGGSCGTCIVECYELSQLYTVF*

>peptide 5 (32 aa)
MFLLNLTQFEATLQITDAFIINIWKLLLWFLM*

>peptide 6 (60 aa)
MLILLLQILEGKDLLNERTNTEFRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK*

>peptide 7 (40 aa)
MKNVKLLFVVASRKREVRGRTRGESESNKWREVVEEHHVG*

>peptide 8 (74 aa)
MLATWFQFFRLGYKSLANNSMCALSKTSQCAEYVKRVHKGQNNKQCNFELVYILRQCMIHCELSSIRVQMTHYL*

Sequence

>CNT0001788
GTCTAATCAAAATTGGGATTTATATTTAATTTGGCCAATTGGCCTGGTAAGAACGAGGCAGTTCTACAGTTTCAAATATCAAATATAAATACATAAAAAG
TACGAAATTACATATACACACGACTCATTAGTCATTGGCCATTGCCTTTGCACAGTTAACTAATAAGCGCGCGAACTACAATGGCTTCCATGAATTTATT
CACCACCATTTTCCTTGTCACCGACGCCCGGAATCCGGCCATCTATTTTCCCCGGCGGTGGCGGCCCAACACTGTCCCTTTTGCCGCCTCTTCGCCGGCT
TCTCCTCCCGAAATAGAGCTCGAGTTCGTCGGGGTATCATCTAACTAATCTTATTCCTACCTATGAAATTTAAGTTATACATCTCACATTTGTGCTTGTA
CTTTGTTCCTAATGTAGCATACAAATTCAGTTAGTTAATTGAAGTGGGGAATGAATGAAAAATGTGAAATTGTTGTTTGTTGTTGCAAGCCGAAAGCGGG
AAGTGAGGGGTCGTACCCGTGGAGAAAGCGAAAGCAATAAGTGGAGAGAAGTTGTTGAGGAACATCATGTTGGATAACAAGATCGAGCTGTATGCCACCT
ACGGGAAGCTGATGAACTGCGGGGGAGGTGGTAGCTGCGGAACATGCATAGTAGAGTGTTATGAACTATCTCAACTCTATACAGTGTTCTAACTTCTAAA
CACACCCAAGTATAGTTGGTCTTTGTCAATCAATAGGCATAACATATTGAGGTATGAATCTTGGATCTCGAGTTCTTCACAAGACATAATATAGTTCTAG
TGTTTTTTACAAAGTAAATACAATCATCAATCTCTAATTGCACGTACATGTTGATTCTTTTGTTGCAGATTCTTGAAGGAAAGGATCTTTTAAATGAAAG
AACAAACACTGAATTCAGATATCTTAAGAAGAAACCCGAATCTTGGAGGCTGGCTTGTCAAACTATTGTCGGAAACAAAGAAAACTCTGGCAAGGTTGTT
GTTCAAAGGATTCCTCAGTGGAAGAAGTAATAGACCATGCTAAGCAGGACCTCTGGATTCTTAGAAAGAAGAGCTTCATATGTTCCTCCTCAATTTAACA
CAGTTTGAAGCAACACTACAAATCACTGATGCTTTCATCATAAATATATGGAAACTTTTGCTTTGGTTCTTAATGTAATCACGCAGATATCTGTATTGTA
TAATTTTCCTTCATGATTTGTAATGCTTGCCACTTGGTTTCAATTCTTTAGGTTAGGATACAAATCTTTGGCGAATAATAGCATGTGTGCTTTATCCAAA
ACCAGCCAATGTGCAGAATATGTGAAAAGAGTACATAAAGGACAAAACAACAAGCAATGCAATTTTGAACTTGTTTACATACTTCGTCAATGCATGATAC
ATTGTGAACTAAGCTCTATTAGAGTGCAAATGACTCATTATCTTTGATGTGCAATTCCCAAAAAATGATGTCATCTTTTTCTTCAAACAAATTGATGAGG
GACTTCCTTCACCACAGC