Detailed information on CNT0001798 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001798

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)7.4798.7310.8714.46100000000001.508leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0123456789101112

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MEEQFILRVPPNVAERIERLLNENNASSSEDKSLNLIVAVVIYVHLHQCIIRF*

>peptide 2 (43 aa)
VILRLVDTYCNSSCQASICDLSRPVHFPALKLLCYSYGGAIHT*

Sequence

>CNT0001798
TTGTAATTTTACGTCTCGTAGATACCTATTGCAATTCCTCTTGCCAGGCTTCAATCTGTGATCTGTCACGCCCGGTTCATTTTCCGGCGCTCAAGCTTCT
GTGTTACAGTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAATGTGGCAGAGCGGATAGAGCGTCTTCTGAATGAAAACAATGCTTCTTCATCTGA
AGACAAGTCACTAAATTTGATAGTAGCAGTAGTGATATATGTGCATTTGCACCAATGTATCATTAGATTTTAATGAAGGCTAATATGGCATATGTGAACA
CAACAGAGGAGGCTATTATGAGGGATTTTTGTATATAGGCCTTCTAGCATGTCCTAATATGTAGTCATTTTTATTCCAACCTGATTACTTAAGGAATTGA
CAAGTACTTCTTTACAAAACATGAAAGTATAACAATA