Detailed information on CNT0001813 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q683C9|AUR2_ARATH, E-value = 4e-26

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001813

Peptides detected in this lncRNA

>peptide 1 (80 aa)
AGRERHGDACTVEHVWCRLLPLVSIELSFQRCRLGPKRKVCPYFSEVNNEEESSNHGFSLLTSLVLAYNAIFFCHSMFFS*

>peptide 2 (40 aa)
MGHATVMMQSHVVSSLYHLYVPQEVVPSMYSSQWYVSTSF*

>peptide 3 (45 aa)
GRERTAWRRLHCGACLVPLAPSGLHRVVLSKMQTRTKKKSLPLFL*

>peptide 4 (37 aa)
MHSLSPRFGATQGMILSGQQIGMGMDLHLPVPRASQW*

>peptide 5 (30 aa)
MQIFQLKACNYLYFTIGPSPYILPWKTCNT*

>peptide 6 (40 aa)
MQAAVNPSCHEAVVMLNNCQIPNTYIRMPKILSLIPILPW*

>peptide 7 (33 aa)
QGENGMATLALWSMSGAACSLWSPSSCPFKDAD*

>peptide 8 (42 aa)
MRYSFAIQCSSLDYFVGFVCSQLKRSNIEETSLFDFRVCTQR*

>peptide 9 (55 aa)
MLCHLYIIYMFLKKLYLPCIHRNGMFQLHSNLIQHPLFDIGIPINCQDFNKEMIH*

Sequence

>CNT0001813
GGCAGGGAGAGAACGGCATGGCGACGCTTGCACTGTGGAGCATGTCTGGTGCCGCTTGCTCCCTCTGGTCTCCATCGAGTTGTCCTTTCAAAGATGCAGA
CTAGGACCAAAAAGAAAAGTTTGCCCCTATTTCTCTGAGGTCAACAACGAAGAAGAATCTAGCAACCACGGCTTTAGTTTGTTAACGAGCTTGGTTTTGG
CCTATAATGCGATATTCTTTTGCCATTCAATGTTCTTCTCTTGATTATTTTGTTGGTTTTGTTTGTTCCCAGTTAAAGCGCTCCAACATCGAGGAAACGA
GTTTATTTGATTTTAGAGTATGCACCCAAAGGTGATCTTTACAAGGAATTGCAAAAATGCAAATATTTCAGTTAAAGGCGTGTAACTATTTATATTTCAC
CATTGGCCCGAGCCCTTATATACTGCCATGGAAAACATGTAATACATAGGGATATTAAACCAGAGAACCTTCTTATTGGTTCATAGATGCAATGTAGATG
CAAGAGATTTATAGAGCTTATGATTACTTTTTGAAGAAGGATTATGTGATAAAGGAGAAACATTTTCATACTCAATCAGTGTAAGGTCCTCAATATCCAC
ATCAAAGTATCCCAAACCCATTACACGAGTTTTATACCCCAGTGGCAAATGCAGGCAGCAGTCAACCCCAGTTGTCATGAGGCAGTGGTTATGCTCAATA
ATTGCCAGATCCCCAACACATACATCAGAATGCCCAAAATCCTCAGCCTGATTCCAATTCTTCCTTGGTGAATATGGGCCATGCCACTGTCATGATGCAA
TCGCATGTTGTGTCATCTTTATATCATCTATATGTTCCTCAAGAAGTTGTACCTTCCATGTATTCATCGCAATGGTATGTTTCAACTTCATTCTAATTTA
ATTCAGCATCCTTTGTTTGACATAGGGATTCCTATTAATTGTCAAGACTTCAACAAGGAGATGATTCATTGACTGAAGCTATGATGTTCAACGTTTTAGA
GGAGAAATTGCTCCATTATAAATTTTTACATTTATAATTGTTTGTTGAATTGCTTGGCATTTTGCCAATATGAAATGAATTTTGTCAATATCTCATGCAT
TCACTGTCGCCCAGGTTTGGAGCCACACAAGGGATGATATTAAGTGGTCAACAAATTGGAATGGGAATGGATCTTCACCTGCCAGTGCCAAGAGCCAGCC
AGTGGTGAATCAAAATTACCAACCTACTGAATATGTACCTTGAGTTGTTGAAGGATGTGATAAGGTATAATAGACAAGAGCTTGAGGTTTTCTGTTAATA
ATTTAGCAACACAAATGGGAAAACACCAAATAGTGAGGTGTACAATGGAACATTGAAGGTTGGGTATGAGATTGTTGTGATTTCTCTCTGCATCAAGGAG
GAGCATTGGACATGATATCTTGAGCATTTTTAGAGAGGTGGCAGGCTTGACAAGATTAAATCATGAGAAGCAATTTGTTCTCGATTTTGAGTTGTCCTCA
CCTTAACATGCTTATTATAATATGACTTTGTGGAAGTTGGAAAAAAGGTTGGCAAGTTGGTTAAAATTGTTAATAAGGGAGATCATGACAATGAGATGAA
ACCTCCCTCAAAGCTTTTGAAAATTCTAATATATTTTTTATATCAACATTGTCAAGAACATGTTTCCTGAATTTTCTCTCCAGCCATTTGTGATTTGTTT
TTTCAGATCTTAGTTTTTCCTCCTTTTGCTATACATGTGAATTCATAACAGCTAGC