Detailed information on CNT0001849 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q4PT23|WTR6_ARATH, E-value = 7e-11

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001849

Peptides detected in this lncRNA

>peptide 1 (94 aa)
RFLLFLVFAFSLYSLTLSVFSLSLLLFDSHLGFRSRNYTCWCSHLPTKPSVCLPNNKNNSSTITHPTLSECTVQHAPKQSIFSRSQRSSSRTAI*

>peptide 2 (29 aa)
MQYGTPFFVFSFFNFFSLDILDVYNSTFS*

>peptide 3 (48 aa)
MSLMGALLSISFAFCVERDLSQWRLGWNVTLLIVAYAVWYPILCILFF*

>peptide 4 (56 aa)
MVAGVSWCVRTRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGTASIYMLLFVLFI*

>peptide 5 (90 aa)
KIFAVFSICFLPLLSHTLCILTLPLTLRFPSRVQKPQLHLLVLPPPYQTLCLPSQQQKQLLHHHSPNPIRMHSATRSKAEHLLKIAKKLF*

>peptide 6 (29 aa)
MSISIFNHGMQTSCFLFIKCNSNFFQIFH*

>peptide 7 (30 aa)
MGTHKSIVSSVLCIDFNDLALNIYDYNLTN*

Sequence

>CNT0001849
AAAGATTTTTGCTGTTTTTAGTATTTGCTTTCTCCCTCTACTCTCTCACACTCTCTGTATTCTCACTCTCCCTCTTACTCTTCGATTCCCATCTAGGGTT
CAGAAGCCGCAACTACACTTGTTGGTGCTCCCACCTCCCTACCAAACCCTCTGTCTGCCTTCCCAACAACAAAAACAACTCCTCCACCATCACTCACCCA
ACCCTATCAGAATGCACAGTGCAACACGCTCCAAAGCAGAGCATCTTCTCAAGATCGCAAAGAAGCTCTTCTAGAACCGCAATCTAACAGGCTCGCATGA
GTTTGTGGTCCTGGATCACGAAACTGAGCCTCTCCTAGAAGGCTCCAACCAGATCCTTATTCAAGCATAGCGTTGATGTCCCTAATGGGGGCACTGTTAT
CCATTTCATTTGCTTTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGTCACACTATTGATTGTGGCTTATGCAGTATGGTACCCCAT
TCTTTGTATTCTCTTTTTTTAATTTTTTTTCTTTGGACATTCTAGATGTATATAATAGCACGTTTTCTTAGATGGGAACATGGGAACCCACAAATCAATC
GTGTCTAGTGTTCTTTGCATTGACTTTAATGATCTGGCATTGAATATATATGACTATAATTTGACCAATTGACACCACATACTAAGGTTACATCGATCTT
GATTATATAATTGATGGCTAAAGAAAAATAATATGTGAATTATTGATGTAGGGTATAGCGGTTTCTGGAGTGATGGTAGCCGGGGTTTCATGGTGTGTAC
GCACGAGAGGTCCACTGTTTGTCTCCGTTTTTAGCCCTCTAATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAACTATACCTTGG
AACTGCTTCTATTTACATGCTTCTTTTTGTTCTGTTTATTTAGATCTATAAAATAGTATTATGAGTATTTCAATTTTCAACCATGGAATGCAAACATCTT
GTTTTCTATTCATTAAGTGCAACTCCAACTTTTTCCAAATATTTCATTAATTCATTCCTAATATAGGTCTATGTGTGCATGAGGC