Detailed information on CNT0001899 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q949R9|MPC1_ARATH, E-value = 2e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0010308, E-value = 1e-06 (S. tuberosum)

Expression of CNT0001899

Peptides detected in this lncRNA

>peptide 1 (40 aa)
NFVTSTRRYVSILDSNTSSQRIFCFTSLASFLCFTRWPVS*

>peptide 2 (43 aa)
MVNRQSREPLPTQEFIMRAYQESQREFNKNLWFCALEFIQSQC*

>peptide 3 (60 aa)
MCVYSALCVRGLLGWYVRLTHIFLYAMPPMRQCNCINSQDGSELKGKAMVEITPTTINSP*

>peptide 4 (45 aa)
FCNFHSKVRIYFGLKYIESEDFLLHFIGFFLVLYPVASVIAVSLR*

>peptide 5 (45 aa)
MTMNENTRRHICINMSNVWMLTSISHHFQTIYFSHKILFIIDNTS*

>peptide 6 (49 aa)
MVRPPNPHLLVCHASNETVQLYQLSRWFRAQRKSNGRDNTDDNQQPIMH*

>peptide 7 (31 aa)
MNILRSFWNSPTDLKTTHFWDPAFNWSLPFA*

>peptide 8 (36 aa)
MVLCFRIHSITMLATIKHLLYFIHLNPQLIVEFVSL*

Sequence

>CNT0001899
AATTTTGTAACTTCCACTCGAAGGTACGTATCTATTTTGGACTCAAATACATCGAGTCAGAGGATTTTCTGCTTCACTTCATTGGCTTCTTTCTTGTGCT
TTACCCGGTGGCCAGTGTCATAGCTGTTTCTCTAAGATAAAGAACATGTGATGCTGTTGAAATTGAAGTGAACCAAATTGATTGATCTCCCAAATCCTAA
TTTGCAGGCCGCAAAATACTGAAAATAGTTCTCATCAAGATGAACATCTTGCGCTCTTTTTGGAACAGTCCCACTGACCTCAAAACAACTCATTTTTGGG
ATCCTGCCTTCAACTGGAGCCTTCCTTTTGCGTGATGTGTGTTTATTCGGCACTGTGCGTGAGGGGTTTGCTTGGATGGTACGTCCGCCTAACCCACATC
TTCTTGTATGCCATGCCTCCAATGAGACAGTGCAACTGTATCAACTCTCAAGATGGTTCAGAGCTCAAAGGAAAAGCAATGGTCGAGATAACACCGACGA
CAATCAACAGCCCATAATGCATTGATGCAAACAAGGTAATTATTCACTCGTCAGGAATCCTGTAGAGCTTTGTCTTTTGTGGTAGAAAAGCAGTGACCGA
GATAGCACCCACAACAATCAACATGCCATAATGCATTGACATACACGAGGTAACTATTCACTCATTAGGAATCCTATAGAGCTTCACCTTTTGTGGTCGA
GATAGCACCCACAACAATCAATGGCCCAAATTGCATTGATGTAAACAAGGTTACTTTTCACTCGTCAAGAATTCTGCAAAGCTTCAAGTTTGGTGCCAAA
AAAGGAGCAACCAAGATGACAATGAATGAAAATACTCGACGACATATTTGTATAAATATGAGTAATGTATGGATGTTAACTTCAATATCTCATCATTTTC
AAACCATTTATTTTTCTCACAAAATCTTATTCATCATAGATAATACATCGTGAGAACTTCTCGACATTGATGACTCAAACCTCTCATCCTTTGTTCACCC
TTCTAACCCAAAATTAGTCATCCTTTAGTTCAAGCCCACTTATTCCTAATCCCATAGGGGTCGTATAGGATGTCATGGTGAATCGCCAATCTAGGGAGCC
ACTCCCAACTCAAGAATTCATAATGCGTGCCTACCAAGAAAGCCAACGTGAATTTAACAAGAATCTATGGTTTTGTGCTTTAGAATTCATTCAATCACAA
TGCTAGCTACCATAAAACATTTATTGTATTTCATACACCTAAACCCTCAATTGATTGTTGAATTTGTATCATTATAAGATTGGTAGATGTTGATGGCACA
CCTCACAGGACACCGTTAGAGTCCATTGGTTATACTTTTTATCGTGTATCTTTAACAATCGTAATTATCAAAACTTGTACCCCGATGGTTTTGGTGACAT
AAAAGTTACTCTCAAGGTAGTCAAACTTAATTCAATCTTTCATGATTTTGGGATATTCATTGATTAGAGTTTTAATTTCAAGATCCT