Detailed information on CNT0001927 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9FF17|ALG6_ARATH, E-value = 2e-46

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001927

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MNIFPDECIFCTCFFQPSSWQCLRHKYPILEVSRLGLLVLGTFAAVWWPYLYSTQSILEI*

>peptide 2 (46 aa)
MVIFSTTASAWALPLALLLLSSPGMIFMASVLYCLALNHKQGMVAI*

>peptide 3 (141 aa)
VILSPPLILRSSTWTPSFFSLPENWRVTSVFCIIRVCVKGQRRLPRKLLMRWTVLSSDSLIFFPASLYFIILYYNQSSRSRKSELAWHTAVLLLSPCLVL
IDHGHFQYNCISLGFTIGAVAAILSGNDLYGFCSLLSSSKS*

Sequence

>CNT0001927
GTAATTCTCTCTCCGCCACTCATTCTTAGATCTTCCACCTGGACTCCGTCGTTCTTTTCGCTTCCAGAGAATTGGAGGGTCACTTCAGTATTCTGCATAA
TAAGGGTTTGCGTTAAAGGTCAGCGTAGGTTACCTAGAAAACTACTCATGAGGTGGACAGTATTATCATCTGATTCCCTGATATTCTTTCCAGCTTCCCT
GTACTTTATTATCCTTTATTACAATCAATCTTCAAGGAGCCGTAAAAGTGAATTAGCATGGCATACTGCTGTGCTATTGTTAAGCCCTTGTTTGGTCTTA
ATTGATCATGGTCATTTTCAGTACAACTGCATCAGCTTGGGCTTTACCATTGGCGCTGTTGCTGCTATCCTCTCCGGGAATGATCTTTATGGCTTCTGTT
CTTTATTGTCTAGCTCTAAATCATAAACAGGGAATGGTAGCTATATGAATATTTTTCCAGATGAGTGCATATTTTGCACCTGCTTTTTTCAGCCATCTTC
TTGGCAATGCCTGAGACATAAATATCCAATCCTTGAGGTGTCAAGACTGGGGTTGTTGGTTTTAGGAACATTTGCAGCTGTGTGGTGGCCTTATCTTTAT
TCAACACAATCCATTTTGGAGATATGAGAAGGATGTACAAGTTTGGCTCCAAAGAGGACTCTCCCCTTAATAGAGAATAAACCACTCGGACACAGGTGTC
TACGACGTGGAAATCAACATAATGATGATTTGATAATTTT