Detailed information on CNT0001977 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9HDX5|ARV1_SCHPO, E-value = 7e-15

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0019508, E-value = 5e-06 (Z. mays)
CNT0007774, E-value = 9e-14 (S. tuberosum)

Expression of CNT0001977

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MFDLGKQQGKIGFINECLSISINMLEGADGCFIWELDVSFNFLLYGYDAFPCINHHHQVH*

>peptide 2 (58 aa)
MNVFFCQLVMTDSTMSRCVWTCFSAYAIKFIITWILELLPGQLMQGWSQMPFTFYKPA*

>peptide 3 (92 aa)
MGYRCIQCGCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILAIDLILHKPKAYRHLLHNVINQETMKFQGLLWKLAVIFLFFEYYV*

>peptide 4 (29 aa)
MMLLKFSHLHCLMIVHFAAILYTKGVHLA*

>peptide 5 (92 aa)
MSVSPSVSICWKVLMDVLFGNLMFLLTFFFMVMMLFHVSITITRCIDLLLALMISSYFKIFFIAMMVWEFPSSVIFIIELFCLSSNAATLKG*

>peptide 6 (51 aa)
PNSSFRTKQDTLRILKGFSSSEFRTQKLGFSSASLSMTQFEFIASHMIVFI*

>peptide 7 (53 aa)
MAHHNLALAVNRFIGNSATYVVSFNFIYSIPNFYKPFLCLGSFTHMVVGVLMF*

>peptide 8 (39 aa)
QFKFQDQARHPANSERIFEFRVQNSEVGFFFRFAIYDTI*

Sequence

>CNT0001977
CCCAATTCAAGTTTCAGGACCAAGCAAGACACCCTGCGAATTCTGAAAGGATTTTCGAGTTCAGAGTTCAGAACTCAGAAGTTGGGTTTTTCTTCCGCTT
CGCTATCTATGACACAATTTGAATTCATTGCTTCTCATATGATTGTGTTTATTTGAGAAGTTAGGCGTTTCCTGGATGCTGGCAGTTATGAAGGAGCTAT
TTTGATTGAATCTGAATTATAAATTCATCACCAATGGGTTACAGATGCATTCAGTGTGGGTGTCCTGTCAAAACACTTTACGTGCAGTATTCTCCAGGCA
ACATTCGCTTGATGAAATGTGAGAATTGCAAGGCTGTGGCAGACGAATACATTGAATGTGAAATCATGATTCTTGCGATAGATTTGATACTTCACAAGCC
CAAGGCCTATAGACATCTCCTTCACAATGTCATCAATCAAGAAACAATGAAGTTCCAGGGACTACTCTGGAAATTGGCTGTCATTTTCCTTTTTTTTGAA
TATTATGTTTGATCTTGGAAAGCAGCAAGGGAAAATTGGATTCATCAATGAGTGTCTCTCCATCAGTATCAATATGCTGGAAGGTGCTGATGGATGTTTT
ATTTGGGAACTTGATGTTTCTTTTAACTTTCTTCTTTATGGTTATGATGCTTTTCCATGTATCAATCACCATCACCAGGTGCATTGACCTTTTGCTTGCA
CTCATGATTTCAAGTTACTTCAAGATTTTTTTTATTGCCATGATGGTCTGGGAGTTTCCATCTTCTGTGATCTTCATCATTGAATTGTTTTGTTTATCAT
CTAATGCTGCAACATTGAAAGGTTAGTAATCATGTTGCCGAATCCTTGGAGAAATCTTTTATTATACTCATTTAAAATGTGCAAGCATTGGACAACTGTT
TGATGGCTCATCATAATTTGGCATTAGCAGTTAACAGATTCATAGGAAATTCAGCAACATATGTGGTATCCTTCAATTTTATATATTCCATCCCAAATTT
TTATAAGCCATTTTTATGCTTAGGTTCTTTCACACATATGGTAGTGGGTGTACTTATGTTTTAGTTTGAATAGCCAGTGGTAGTAATGAAATTAACGTGT
GTCTCGTACAAGAATTAAGTCAGTGAATGGAATAAAGATAAAATGAAAGTATTATTTTGGTTGTTTCACTGAAAATGGGTTTTTGATTATATCATCCAGA
ATGTCAATCCAACTATTATTCCAATCAATTGACTGCATGTGGTAGTATTAATGTCAATCCAACTATTATTCCACATGATCAAAACTGCATTTTCTTTTCT
GTATTTGTGATTATTTTGGAAAATTGACTCTAGTATTGCTGCTTGTATTTTAAATATGATCATAATGCTTCTTGTTGAGCAATGAGCACTGATGAACGTT
TTTTTTTGTCAACTAGTGATGACTGATTCAACTATGAGTCGTTGTGTTTGGACCTGCTTCAGTGCATATGCTATAAAATTTATTATCACTTGGATACTGG
AGCTATTGCCGGGGCAATTAATGCAAGGCTGGAGTCAAATGCCATTCACATTCTATAAACCAGCATGATTTAGTTTTGCATTCTTATGCTAATGTATTAG
TAGCCGAATTTCTTGGCAAGTGTTTCTGAGCTGTATATATATCCTTGACACTTTTTTTTCTTAAATTTAATTTGAAGCTCAAACATTTCCTAGGGTTCTC
CAGAACGTTATTATGATGCTTCTTAAATTTAGTCATTTGCACTGCCTAATGATCGTTCATTTTGCTGCCATTTTGTATACAAAGGGGGTACATTTAGCCT
GATCAAACACAGTATTTTACTTTTTATGCGAATAATCGTAAACGGGGTGCAAAATATCATCCAAATTTCCATCAA