Detailed information on CNT0001990 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9S834|CLPP5_ARATH, E-value = 4e-34

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0001990

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLMNFGRLRGVHVREFGLSENSTLWGSCR*

>peptide 2 (56 aa)
MSNIIVAQLLYLDAIDPNKDIVMYVNSLGGSVAAVWVPFCLAQGLKEIDIACQIQG*

>peptide 3 (42 aa)
MGAILLSAGTKGNRYSLPNSRIMIHQPLGGAQGGQTDIDIQV*

>peptide 4 (58 aa)
YISSFFIKLKQAKQIVKMANAPCLRCSSLALHCSTHTSSSSHSQSLSLSSHTSRLSWE*

Sequence

>CNT0001990
ATTATATTAGTAGCTTCTTCATAAAATTGAAGCAAGCAAAGCAAATAGTAAAAATGGCGAACGCACCCTGCCTTCGTTGCAGCTCTCTTGCTCTTCACTG
CTCAACGCACACTTCTTCTTCCTCTCACTCTCAGAGCCTTTCTCTTTCTTCACACACTTCTCGCCTCTCCTGGGAATAAATATAGTACTAAGAAATCTCC
TGGGAAGGTGAAGGCCGTGTATGCTAATGAATTTTGGGCGCCTGAGAGGAGTTCACGTCAGGGAATTTGGTCTATCAGAGAATAGTACGTTGTGGGGGAG
CTGTAGATGATGATATGTCTAACATCATAGTTGCCCAGCTTCTTTACCTTGATGCCATCGATCCTAACAAGGATATTGTCATGTACGTAAATTCTCTGGG
AGGATCAGTTGCAGCTGTATGGGTGCCATTCTGCTTAGCGCAGGGACTAAAGGAAATAGATATAGCTTGCCAAATTCAAGGATAATGATTCACCAACCGC
TTGGTGGAGCTCAAGGAGGACAAACTGACATAGATATACAGGTATAGGCTCCATTTTCATTTTTCCACCTTATTTTTTTACATAAACATCTTTTTTTGTT
TCTAATAGTTTATATACTATGATCATTTGAAATTAAAGCATGTCTAGGTATTTGAAGCCGAGTAAGTGTTCTGGTAGAAAGACCCAATTTCTTTTTTAAT
TGCGCTTGATGAAATTCCAAAATAGAAGTGCATTTTGTTTATGTAGCAAATGGACCAAATTGGTCCTTAGCAGTATTTAAGTTCTGATGTTTTCAATCAG
AAATGACTTGACACTGTGCCAGAGTTATTCTCTTTGTGACAGCTCACTTTAAATTACAATTTACAACTCTGAGGTTTGTTCCTGTGGTTCTAGTACAATA
AGCTAAAATGCTGAGTATTGGATTAAGTTGCTGGTTACATCTTGCTCTTGATTATCTTATTTTGAGAAAGTCTCTTGGAATTGAAAAATGAAAAACTTGG
GTCTGTTCAATCAGTAGTATAGTTTAATGCAATTTTTGCATTTTCACC