Detailed information on CNT0002022 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q40784|AAPC_CENCI, E-value = 2e-12

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002022

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MKNQMVFVQQLEAVGTFLLSFFSHPASSEGLHV*

>peptide 2 (50 aa)
MSFSCIVSSFTTALIFIGKFVFSFFLSFTSFLLLQVFHICFLFLIFLNFL*

>peptide 3 (45 aa)
MSSISRLAIESFDSLNINAIGAKCILYLKKKGEQTVFVIAIFIFE*

>peptide 4 (39 aa)
MSSKAIWKQHKPIREGISTCLARETGCGHWIGTLHLFLP*

>peptide 5 (35 aa)
MLGLQGRKEYKLKCFQMMFMELKGHNPTLKATLTL*

>peptide 6 (111 aa)
MWSLDRDPSPLPPLDNQSFVELILKSTKVDLKTPCSFEFRLRISLNADNLILIPQVRNTANKAFSFSFTLCNYLSVSDIRKKNNIPAAQINIQHSQAFQF
QTVGAEFALSF*

Sequence

>CNT0002022
TTTTAATGAAAGGGTTGCATGCTTTAGGAGTGTTAAATTTTTTTCCTACCTTTGTTTGACAGATATGTTATAATTTTTTTTTCATATTAATATACATCTC
TATGTCGTTTTCTTGCATTGTGAGTTCATTCACCACTGCATTGATATTCATTGGTAAGTTTGTTTTCTCATTTTTTTTGTCATTTACATCTTTCTTATTA
TTACAGGTATTTCATATTTGTTTTTTGTTTTTAATTTTCCTCAATTTTCTTTAATGGATTTCTTGATGTTTTCCATATGAAAAATCAAATGGTTTTCGTC
CAACAACTAGAAGCTGTGGGAACTTTCTTACTTTCTTTCTTTTCTCATCCTGCAAGTTCTGAAGGACTACATGTTTGATTGTTTCTTGGAAGAATCATCG
AAAGGAAGAACTTCTTTTTATGAGCAGTAAGGCTATCTGGAAACAACATAAACCAATCAGAGAAGGAATATCAACTTGTCTAGCACGAGAAACAGGATGT
GGTCATTGGATAGGGACCCTTCACCTCTTCCTCCCTTAGACAATCAGTCATTTGTGGAACTAATATTGAAGTCAACAAAAGTTGACTTAAAGACACCCTG
TAGTTTTGAGTTTCGGCTTCGCATCTCTCTCAATGCTGACAACCTAATTTTGATTCCGCAAGTCAGAAACACTGCTAACAAAGCATTTTCTTTTTCCTTT
ACACTATGCAACTATTTATCGGTATCAGATATCAGGAAAAAAAACAACATCCCTGCTGCACAAATTAATATCCAACACTCTCAAGCTTTCCAGTTTCAAA
CTGTGGGCGCTGAATTTGCTTTGTCTTTCTGAGTATGCTCGGGCTTCAAGGGAGAAAGGAGTACAAGTTAAAGTGTTTCCAAATGATGTTCATGGAATTG
AAAGGACACAATCCGACTTTGAAAGCTACATTAACATTGTGATGTGGTTCAACAAGTATTGCAAATGAGCAGCATTTCCAGGCTAGCGATTGAATCATTT
GACTCCCTTAATATTAATGCTATTGGGGCAAAATGCATTTTGTATTTGAAAAAGAAAGGGGAACAAACTGTATTTGTCATTGCTATCTTTATTTTTGAAT
AAATAATTTGGTTCAGTGAAGGACGTATTTTAGCTTTGGATTATGAAAAAAGACAAGACATTCTGA