Detailed information on CNT0002033 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002033

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.9882.9082.97102.1991.1840.9261.1580.9684.6451.1231.5332.38300leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.250.50.7511.251.51.7522.252.52.7533.253.53.7544.254.54.755

Peptides detected in this lncRNA

>peptide 1 (72 aa)
GEFGGAVNLAVGLEKLKEALQILNSPSPSSPTVLRPSLCFAPNPTPPRSFLSFMYPRTTPTLNHSMSIWMIM*

Sequence

>CNT0002033
GGGTGAATTTGGCGGTGCGGTGAATTTGGCGGTGGGACTTGAGAAACTGAAGGAGGCTCTCCAAATCTTGAATTCTCCTTCCCCTTCTTCCCCTACTGTC
CTAAGACCTTCACTTTGTTTTGCTCCCAACCCCACTCCTCCTCGGTCTTTCCTCTCATTTATGTATCCAAGAACGACGCCGACTCTAAATCACTCTATGT
CAATTTGGATGATAATGTGAGTCACCAGAAAGAAAGGTTCTTTTTGGTTTTCCATACCTCAGATTGAGTTAGATGAGCTGGAAAGTGTTTCCATTCTGTC
AATGACCCTTGCATGGGATGAATTTTCCTTCTCTACTTTTCAAGAAGCCCATTATTCGCTTCAAGATTCTCTAGACCAGCTGTAGATCCTCAGTACAAGG
ATTTAAGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCA