Detailed information on CNT0002051 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|F4JEP5|MSH5_ARATH, E-value = 3e-19

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002051

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)000.771000000000000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.050.10.150.20.250.30.350.40.450.50.550.60.650.70.750.80.85

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MNSFIQDMERAITTHQRLVFTYIVVPNPFDKGGNFCS*

>peptide 2 (31 aa)
MALARQNNYVRPSLTKENLLDIKNGRHVLQEM

Sequence

>CNT0002051
ATTTTCTTCCTAAACTCAAATAGATAATATTGAGTTTGCCTTCAAAATTATAACACTTGGTCTCTGGTGCAAATCTTACTTTTTTATGAATTCTTTTATT
CAAGATATGGAGAGGGCGATCACCACACACCAGAGACTTGTTTTCACATATATTGTTGTTCCAAACCCATTTGATAAAGGTGGCAACTTTTGTAGTTGAA
CTGGATTGCTTTTTGTTAATGGCATTGGCACGGCAGAACAATTATGTCAGGCCTTCGTTGACTAAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATG
TTTTGCAGGAAATGAC