Detailed information on CNT0002121 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002121

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)9.1897.8179.6220.9684.43417.37118.5778.1751.7357.9784.1515.9763.8261.8220.614leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)01234567891011121314151617181920

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIRSLTAHGSRIVVLCSDHLGDNASPNFNLRPTCAYFITEVAK*

>peptide 2 (31 aa)
MLILFLANQPPLVVIFLVAQFINFTNMEHRK*

>peptide 3 (29 aa)
MSYIFHTFLKILFLLLCLPEMVRPRGDMI*

Sequence

>CNT0002121
TTCCAATTGAGTAACAGTGGATTAGGTAAATGGTTTCTACATGTTTAGGGGTGTGGTTAGCTTACTTCTATAAAATAAATTGTTTCCAATTTTTTCATGG
CTGATGTTGCATATGGATGACATTTTATACTTATACTCTTTCTATTATTATTGATAAATTTCCTTTATTTTCACTTTAACCTAAGACATAATTGTTCTAT
AGCTGTTTTTTATGATGAGTAGGGGCACCATAATCCTTCCTTTCCCAGTGCTTGAATCTTTTCTTTCCTTAAATTGATTTTGGGCGCTTATTTGTCTTGA
TTGTATTTTCTGTACTTCCAGTAAAGCCTGTTTGTAAACTCAACCAAGTCTTGCTTTTCAGAATCAAATTGTTAATGGACTCTTGAAATGCTAATGTTAT
ATAGAAAGGATAATTTTTATAGAAATGTAAAAGTGTGAAATGATAATATAACTTTCCAAGCTTTTCAGATGAATTTCTTGGAAACTATAGCTCTAACTCA
AGACATTACATGATGAAGTTCAATATATATTGACAGGAACAAGTAGAACAGGTTCAGATGGTTTATGTTAATATTGTTCCTTGCTAACCAACCTCCACTT
GTAGTGATATTCTTGGTCGCACAGTTCATAAATTTCACCAATATGGAACATAGAAAATAGCCAAGGGCCATAGAGCACCAAAGGAAGCATGTTGATGTTG
ATGGTTTCTTGGTAAGAGTGATAACTTGCAACCATACGGGCAAGACAGGTTCCATGATAAGATCTTTGACTGCACATGGTTCTAGAATTGTTGTTTTATG
TTCAGATCATTTAGGAGACAATGCGAGTCCAAATTTCAACTTGAGACCAACATGTGCTTATTTCATCACTGAGGTAGCAAAATGAGCATCCGGAAGGGCT
CACATAGTACAGGCTTCCATAGCTGATGGTGTTTTGTCAGGCAAGCATGTTCATAGCTTAGCTCATGCAACTTCTGGATATCACAAAGTTCTTGAAGAAA
ATAGCAAACTATACAATCAAGTTCATGATCTTAAGGGTAAATTTCTGATTGGTTGGTTGCTATAAGCTTAGTATGAGTTATATCTTTCACACCTTTCTAA
AGATTTTGTTCCTTTTATTGTGCCTCCCTGAAATGGTTAGGCCTCGTGGAGATATGATATAGGTATAGGTTGGATAAAATTTAATTCGACTCGACACATT
TTTATACTTAATAAAAAAATTCATTTACTTCAAATTTGTGGATCTTAATGTTTGGGATGAAGAATAATGTAATATTAACACACACTAGCTTGATAATATG
ATCCATGATTTAACTAGAATGTCTACAAAGAAAAACTCAGGA