Detailed information on CNT0002174 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SYA6|RPBAL_ARATH, E-value = 1e-37

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0018457, E-value = 4e-08 (Z. mays)
CNT0040066, E-value = 2e-06 (S. moellendorffii)

Expression of CNT0002174

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNSNFGQV*

>peptide 2 (50 aa)
MAMHQFFFSFMNCFGTSRSCLCAGSGQVCLLSVLRSYEKTQLMLISHIMI*

>peptide 3 (48 aa)
MTKMLLLYSMPYGNASIFLFFYELLWYKQVMFVCWFRSSVFVISSEEL*

Sequence

>CNT0002174
TTTCACTTTAATTGCTTAGTGCAGTGCAGAATGGAAGACTAATCCCCTTATGGAAGAGTCCAAAAAAGTTAAGCTGCCTACTGTGGGCTACCCTGGGGTC
ATGAAGCGGCCCATTTAGTTGTGAATAGCAAAGATCTTCAAAGCCGTTTTGTTCATGAAATAACCTCAACGGCCGCAAGCACATTTATTAGAGGCGTGGT
TTTGTTGTGAGTACTGAGCTGAGAAGAGGGAGAAGATGATCATCCCCGTTCGTTGTTTTACCTGTGGAAAGGTAATTGGAAACAAATGGGATACCTATTT
GGACCTTCTCCAGGCAGATTACAGTGAAGGAGATGCACTGGATGCATTGGGACTGGTTCGGTATTGTTGTAGGCGCATGCTTATGACCCACGTTGATCTC
ATTGAGAAGTTGCTCAATTACAATAGTAACTTTGGACAAGTCTGATCTCAATTAAGAAGAAGGCTTGAGGAATAACAGATGACCAAGATGCTTCTGTTGT
ATTCCATGCCCTATGGCAATGCATCAATTTTTCTTTTCTTTTATGAATTGCTTTGGTACAAGCAGGTCATGTTTGTGTGCTGGTTCAGGTCAAGTGTGTT
TGTTATCAGTTCTGAGGAGCTATGAAAAGACACAGCTTATGTTAATATCTCATATAATGATATGATATGACAGACCAAACTTTTGAATAATCTGACTGGT
ATTTTTAAAAATCTGATTGTTTTAGAATGTCGACATTGACACCAATGCATGTCCTTAATTTATATTAGGAATATTGCTACCTGACTTACTCTGCTTGTTG
TAATTTAAATTGTACAATGCATATGAATAATTCTTAATCCTTCTACTATATTTTCCT