Detailed information on CNT0002240 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q40519|PSBR_TOBAC, E-value = 2e-16

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002240

Nothing found.

Sequence

>CNT0002240
AATGTCAAAAGTTATCCTGAATGAAAGTTTCTTACCGCCAGCGTAGACATCACCGGTTGGAGACCAGTCCTTGGTGTCGTAGATAGGACTGCATAATAAT
CTGTAACCATCGACATTAGCACCGTATTTGTCTACAAACTGGTAAACACCCTTTCCCTGAATTGATGTTTGGAAAGTTAGAAGAATAATATAGTAACTAC

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA08G18510.1 Uncharacterized protein protein coding CNT0002240 253 91 CDS Trans
GLYMA15G40450.1 Uncharacterized protein protein coding CNT0002240 275 102 CDS Cis
GLYMA15G40450.1 Uncharacterized protein protein coding CNT0002240 286 100 CDS Cis