Detailed information on CNT0002260 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002260

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)1.2161.6262.1048.271.6740.8090.5060.8319.1287.08810.3588.6748.5764.0764.943leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)01234567891011

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MEQLPANRSEAKRPPPQVLHQSDVDEDDENVKQLDECSSLYRLMQDCVVRTNRNWKECQTGMVSIFHTLFCPFLFA*

>peptide 2 (67 aa)
KSKLSLFLGALFKEVICDVHTVEFYFFVKRFAVKKQKWSSYRRTGAKQNGRHRKCFTRAMWTRMTRT*

>peptide 3 (29 aa)
MIVCFMNDNSSSTCNLVPDLDLVLCVYFA*

>peptide 4 (49 aa)
MLFSLSLDAGLRCSNKQELERMPDRYGIHFSHFVLSLSVCVTCFRFLKF*

Sequence

>CNT0002260
CCAAGAGTAAATTGTCGCTTTTTCTTGGCGCACTATTTAAAGAGGTGATATGCGATGTACACACGGTTGAGTTTTATTTTTTTGTGAAACGCTTTGCAGT
TAAAAAACAAAAATGGAGCAGTTACCGGCGAACCGGAGCGAAGCAAAACGGCCGCCACCGCAAGTGCTTCACCAGAGCGATGTGGACGAGGATGACGAGA
ACGTGAAGCAGCTCGATGAATGCTCTTCTCTCTATCGCTTGATGCAGGATTGCGTTGTTCGAACAAACAGGAATTGGAAAGAATGCCAGACAGGTATGGT
ATCCATTTTTCACACTTTGTTCTGTCCCTTTCTGTTTGCGTGACGTGTTTTCGATTTCTAAAATTTTAGTTGAATGTGTGTAAGAATGTATTGTTGGAAT
TTTTTCATTCGGAATCCAACTAACTTATTGTTCGTCTGATATTGAATTATAATTTATGAAATATTTCCTTCAGAAAGTTTAGCTGCCATGATTGTATTTG
AATTAATCGTTGCAGTTTTGCACCAAAAAAATAATAAGAACAGTTAATTATTGATGAACTCTCTTGACAGAAGTATATGCTTTGAAGGAATGCTTTGAAA
AGAGAAAGAACGTGCAAGGAAAGTAGAATTTTGAAGAGAGATTTTTTTTTAGTTGACAATGACAATGAGGCTAACCTCTGTTCTCCCTAGTTAATCTTCG
TGGTTCTACTATGATGTACAGAGTACAGACGCTTACTCCTACTAAAATGAATGATCTTGGGAATGATCTTGTAGTATAGTTCAATTGAAATTTGAAAGTG
ATTGAGATTGATCTTGGGGAAAGGGAACTTTTATATACAGAGATATGTGATAAACGGTGTTTTCTGATTGGAAATACCAAATACGTGTTTTGAGGTGAGA
GCAATCACCCCCCTTAACTTGCTTTTACTTCCTAAAATCACTTGGATTGTGTATTTCTTGCTGTTGATGATAGTGTGTTTTATGAATGATAACTCGTCAA
GCACTTGCAATTTGGTGCCTGATCTTGATCTAGTTTTATGTGTTTATTTTGCATGAGGCTGTTGAAGCAATGGTACAATAACTTTAGAAGTAATTAGAAG