Detailed information on CNT0002267 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002267

Sequence

>CNT0002267
TGTGTTGGTAGAAAAGAAAGGCTTGCAAATACCTGATAATGTTCATTCATGTTGAATTTAGAAAGCTTATCCCAAGATAATGACTCATCAAATTTGCTAT
CCTGAGTTTTACCCAGCAGAATGATATGGGCACATTTATGCACAAAATATAAAATGATATTGAGTAAAAGAGAAAAAGAAATAATCAGGGGGGAAAAATA
TTAACAGTTCAAACTATAGGTCAAAGATTTACTTGGACTTGATTTTCCCCAAATCCAGTAGATGTAAATAGTGATTGTAATTCGCCAAAAAACACTCTGC
AAGCAATTCACAAATCAAAGTTACTTTATAAACTTAAACATGACCTTTACGATAGTATAATGCTGGACCTTAGGAGCTAAAAGATTTACAGAAAAATCAA
TGCCTTGTATGCTTAACCAGGGAGTTGAAG

lncRNA-RNA interactions

Number of interactions: 9

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA13G40740.2 Uncharacterized protein protein coding CNT0002267 890 423 CDS Trans
GLYMA13G40740.3 Uncharacterized protein protein coding CNT0002267 890 423 CDS Trans
GLYMA15G04700.1 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.2 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.3 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.4 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.5 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.6 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis
GLYMA15G04700.7 Uncharacterized protein protein coding CNT0002267 1142 430 CDS Cis