Detailed information on CNT0002310 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LHE3|ASPG2_ARATH, E-value = 3e-07

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0002310

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00.9870.60593.5942.11100026.98514.83629.76232.05132.819166114.307leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0102030405060708090100110120130140150160170180

Peptides detected in this lncRNA

>peptide 1 (29 aa)
GIATYISTRDTYHYKATNITSFHTTTYIT*

>peptide 2 (35 aa)
MYEDVVRWECHVHAGKHECYCWCNYWDCVACVKPS*

>peptide 3 (28 aa)
MLLLVQLLGLCSMCQTLLDLSRKEDGKKK

>peptide 4 (56 aa)
MLAITFSTEFTLSGAGAMAKHVTLPAVLCMRMLSGGSVTFMPENMNVIVGATIGTV*

Sequence

>CNT0002310
GGGATTGCTACATATATATCAACCCGTGACACATACCATTACAAAGCTACAAATATAACTTCTTTTCATACTACTACATATATAACTTGAAACTTGGAGA
CTTACATGCAATGCCTTAAACATGTAGCTCACTATCTTCTACTAAATAGTTAGCAATAAACTCTTAGCAATGCCAAAACCCAACCCATATCAAATACCAA
TTCCCAAATAGGAGTAACTTTGCAATGCCAATTCGACACGATTTTTATTATTGTACCCACAAATCATGAAAATTCTTGACCTAAGAACCACTTATTATTA
TGTATTAGGTGCAAAGCTCACGAGCAACACCAAGCCTTGAGTTGGGCACGTCGAAGAGCACACGGTGGTTTTGCTGTTGCATGTTGGCGATCACGTTCAG
CACCGAGTTCACATTGTCCGGTGCCGGTGCCATGGCCAAGCACGTGACGCTGCCGGCGGTGCTATGTATGAGGATGTTGTCCGGTGGGAGTGTCACGTTC
ATGCCGGAAAACATGAATGTTATTGTTGGTGCAACTATTGGGACTGTGTAGCATGTGTCAAACCCTCCTAGACTTGTCACGCAAGGAAGATGGAAAGAAG
AAGA