Detailed information on CNT0002348 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9S9T7|VP282_ARATH, E-value = 1e-14

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002348

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MYLQTYPHPIMQQHCHEGRVRRGKMKMKLPSLLWCQLISCTHL*

>peptide 2 (62 aa)
MCDVWEVRGVMWFCSIITRDETRRGCVWLSTYYYCSLQHRRVAVENNLSFFQFLFLFLLFYTY

>peptide 3 (40 aa)
MGGAWCDVVLFNYYARRDETRLRVAEHILLLQLTASTCSS*

Sequence

>CNT0002348
GCCTTGCCCATAAAGTAAAAGCTTTAATGATCAGCACCAAAAAGCTACTATAATAATTTGTAATTATACAGGCCTTGAAAATTAATATATTCTATAACTG
TCACAAAATAGATAAATGGTCTCCTTCCAACAAGACATTAATAAACTTAAAATAAAGTAAAAAAATAAAAATAAAAGCACCAGGAAGCAAATGTATTTAC
AAACATACCCCCACCCAATCATGCAACAACATTGCCATGAAGGAAGAGTAAGAAGAGGCAAGATGAAAATGAAGCTGCCGAGCCTGTTGTGGTGTCAACT
CATCAGCTGCACCCATCTTTGACACCCTTGTAAGTCATTCCTTCATTTTTGTTTTCCCCTCAAAATCATGTAACAAAGTAATGCAATTGTAAAGACAAAT
ATAACATATATTCATCAATCATGTGGGGATAGATATTATTAATATATCTCCAACATCAACATAGGCGTTCAGAATGGCCTCAGCAAAGTTGTCATACATT
TCTCTCTCGCGCTTGTGTTCCATGTCTGAAACTGAACACCAGCACACACTGCTTTAACCTTGTTTTTGTGAGAGTGGGGGATTGGAGAAGAGGACGAGAC
ACGCGCAAAGAGAAAAGTTTAGGTTCTGAAGAGCAAAACTAAAACTAAAACCACAAAAAGAGAGTGAGTGAGTTATTATGTATATGAGGAACAGAAGGGA
AATGGATCTAACATCATTTTTGCAGGCATTAAGATGACCCAAGAGAAGAAAATGAGAAAAAATGCAAAATTTGTGTCAGACAATGCATGAGTAACACGGT
ACAGGGAACATAACAGGGATTGGCATTGTGGGTTTCAACATGAAAATGAAAGCTGGCTTGTGAAGAACCAAACATGGAAAGGGACATAATCATAGTGACA
CGCATAGGCGAATGAAGGAGTTGAGAAAGGCATGAAAATCAGAATGAGATCGATTTGCAAAGAGAGAGAGAGAGAGAGAGAGAAGGGAAACGCCTATGTT
CATTGCCATTGAAATTGAATAGATGTGTGACGTATGGGAGGTGCGTGGTGTGATGTGGTTCTGTTCAATTATTACGCGAGACGAGACGAGACGAGGTTGC
GTGTGGCTGAGCACATATTATTATTGCAGCTTACAGCATCGACGTGTAGCAGTTGAAAACAACCTTTCTTTCTTCCAATTTTTATTTCTATTCTTATTAT
TTTATACTTAC