Detailed information on CNT0002370 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002370

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)7.8439.7110.8411.7611.2821.0740.840.3943.9515.9686.3013.3376.66412.918.947leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)01234567891011121314

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MLPTRSTDKTHSSFINLCVWRGWKQQKDLLYLLCLLCVKYLFFFHLVCTSELA*

>peptide 2 (31 aa)
MAGMETTEGFTVFIVSFVCKISFLFPPGMYI*

>peptide 3 (48 aa)
MNSAKSKSCNKRLLWRMEVMRIIMLRLPTGRRKMTHLLQRMVREGDQH*

Sequence

>CNT0002370
GACAGCTACAAGAAATGCTTGTATAGTACAGTGAGTATAGTAAATATTAAACAAGTTGATTCTGTCTGAGTTAGGACAGATCAGGCATCTTTGGCCCTCA
CCGAAAAAACTCTGGGCAATTTTTTTTCATTCTCCGCCATTATGGGATAGAAGTTTGAGTTTCAGAGAGCACAGAAAGGCCCACTATAATGAATTCCGCA
AAGTCAAAGAGCTGCAACAAAAGGCTTCTCTGGAGGATGGAAGTGATGAGGATAATCATGCTGAGGTTGCCAACGGGGAGAAGAAAAATGACTCATCTTC
TCCAACGAATGGTACGTGAAGGAGACCAACACTGAGAAGAAAAAATGTCTCTTCCAATCAATGCTTCCTACACGATCAACAGATAAAACCCACTCCAGTT
TCATCAACCTTTGTGTATGGCGGGGATGGAAACAACAGAAGGATTTACTGTATTTATTGTGTCTTTTGTGTGTAAAATATCTTTTCTTTTTCCACCTGGT
ATGTACATCTGAACTTGCATGATTCGTGAAGTCTCTTGTAATATGCCAAATTAGATTTTTTTTGGCAAGCAACAAACATTCTGGTTATAAGAGTGATGAT
TTCGAAGATATAACACTCCAAACGTGGCATTTAAGTAATTAAGGTTGCATGATTGGATGGATC