Detailed information on CNT0002444 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002444

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.2620.3160.32300.3750.6290.8610.3460.6431.4391.3421.4662.42600leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.6

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MHPLIGKCTSFLFFRYPKYFFLIYITVKSYSLQPILIVP*

Sequence

>CNT0002444
CACCAATTTACTAGTTTTACATAGCAGACATTGCTTTCTCAAGAAAATTTTGATCTCATGTAGTCATATTCTAGTTTAGGATAGGAAATTAATTTGTTTA
TGTAAAATAGGATAAACTGAGGGATATTTGTGTGTAAACTGAGTCAGAGTACACAGCAGATGCTCGTTTATATAGACTGATAGTAATAATCGCACATAAT
TAGAGGAGATAAGTTTCTCCTAAATGAGATATGTTTCCTACAAATCAGATCCTAATCAAATCTATACATTAAATATTTCTGATTCTCAACACTCCCCCTC
AAGCTGAAGCTTACTAAGCTTTCAGCTTGTTACAAGAAAATCATTTGTTTCCAACAAAAAGATATAAATTGAGCTCCAATAAAGACAATATCTTGAAGAC
AACTCAGGGATCTTGGTGAAGTCAGGGAATATTGCTTGAAAGAGAGAGCTGGAATACCCACCAGCCTAAGAAAATTCAAAGCAAGTCCCGACTTTCTTAA
AACCAACATTTGAAAGCTTCAAACAATATATTAATTTTCATCTGGTCATTCTTTTTAATTTTAGTAGGAATCGATTCTCTCTCTCTTCCCCTTTGCTGTT
TTGTATACATGTTACATTTGCATTTTTTATAGTGGGCTGCATGGGTTGGGCCAGGGCCAAACTATTTGAGAATTGAGTCAAATGATTATTTGGCAATTGC
TAAATGCACCCTTTAATTGGTAAATGTACCTCATTCCTTTTTTTTAGATACCCAAAATACTTTTTTTTAATCTATATAACTGTAAAATCCTATTCTCTAC
AGCCAATTCTCATTGTTCCTTAAACCCTTCTTTTTTTCTCCCCTCTCCCTCTTCTCTCATCTGTCAAAGGTATTAGAGTTCTATGTTAATCTTATTCTGA
TAGGCCCCTAGTGCAGGATGTGGCCCAAGTAAATAAGCCCAAAGTGTGGGGAGTGTATGTGAGGAAGAATACGAGAGCGGAGAGACAATGATGATGTGGC
AGTGAGAGAAAGAGAGTGAGGATGGATGGTGAGGTATTCTGTTATAGAGGGACATGGGGGTGAGTGAGGAGGGATTATGATTGTGCGTATCATTCTGTTA
GGCAGAGAATACATTCATTCTCTGAGAGGAGC