Detailed information on CNT0002447 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002447

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)2.2062.2912.7660000000.1020.3320.604000.432leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.62.83

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PNTTSQSCTRHGRQYSSCSQPSAGDIDWVFFEKHYFHHLNSGWLRFLILGQSGSNS*

>peptide 2 (33 aa)
MKCLFSKGILCHEEEKMFRNAGDFLDKGGYFNK*

>peptide 3 (54 aa)
MKCLLDKGYFCREEGKMLCNAGMGMKDFNVIRTVCLNFGRDHFHLLRFGRDLEL*

Sequence

>CNT0002447
CCCTAACACAACCTCACAATCTTGCACTCGACATGGCCGCCAATACTCGAGTTGCAGCCAACCCAGTGCGGGAGACATAGATTGGGTGTTTTTTGAGAAG
CATTATTTCCACCATCTCAACAGTGGGTGGCTTCGGTTTCTCATCCTTGGCCAGAGTGGATCCAACTCATGAAGTGCTTGTTCAGCAAGGGGATACTTTG
TCATGAGGAGGAAAAAATGTTCCGCAATGCTGGAGATTTCTTAGATAAAGGAGGCTATTTCAACAAATAATGCATGCTGGGAAATTGGAGAATCACCCAT
CAAGATATGAATAAACTGGGAACCTAAAATTTCTTCGGTGCTTGGTAGAACACAGAGCCAAAAGCTAAGTCGGTTACAAGAGTCTCACTATTAATATTAT
GAGCACAGTGAGCAACCGTCTGTCAAAAGTTGATAACTGGCAAAGAATCAGTTTCAGCCCCTGCTTCATTTAAGCAACAATAAGGTTGACAAAGAATCAG
TTTCAGCACTGCTTGAACTCAAGCAACAATAAGTGCAGCAGCCAATACTCGAGCTTGCTCATCCTTGGCCCGAGTGGGTCCAACTCATGAAGTGCTTGCT
CGACAAGGGATACTTCTGTCGTGAAGAGGGAAAAATGTTATGCAATGCTGGTATGGGCATGAAGGATTTCAATGTCATTAGAACCGTGTGCCTCAATTTT
GGTAGAGACCACTTTCATCTTTTAAGGTTTGGCCGTGATTTAGAACTCTGACAGACTGTGATACTCAATTGGACAAGAACCTAGGCTTGATTTATACCAT
TTTTATATTTCATATTTGATTTTGTACCTTAATGGAAACTTATTTTTACGGTTAAGAAACGATGGAGTATGGTTCCTTATTATTGGCAAAATTCCTCTTA
ATTACGTAGGTTGGAGCGTAGGTTTTATTATGATAATTTTATTCTTATATTGTGTCTGCTGTACAGGAGATTTCTTAGATAAAGGAGGGTATTTCAACAA
ATAATGCATGCTGGGAAATTGGAGAATCACCAGTTAAGTTAGTGGGCTGAACATTAGTTAATGACCTTTTTGGAAACCTATTCTGTTCATATTGTTTTTA
TTGGTCTAAAATTTCCCATGTAGCCTTCAGTGTGTAAGATTGAAA