Detailed information on CNT0002470 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SGU9|MGL_ARATH, E-value = 2e-22

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002470

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGANVLSTTTVTPFRCAMWHSSASTMSRSVTS

Sequence

>CNT0002470
GATAAATGCATGCTTCTTCAAGACATGTTAATTAGTACAATTAAGATTATCATTAATATTCTCTTGGTACTATTAATGCTTAATTAATGAATAGCGAGAG
AAAGAGTTAGGAAAGACGACAAAGATACCTGCAATGATATCGGCCCCACCGCTGATGAACTTGGAGATACTGTGAACGACAACATCAGCACCAAGACGCG
CTGGCGAAAGCACCATGGGCGCGAACGTGTTGTCCACCACCACCGTCACTCCCTTCCGGTGTGCCATGTGGCACAGTTCAGCATCAACCATGTCAAGATC
CGTCACCTCCA

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA10G31590.1 protein coding CNT0002470 812 281 CDS Cis