Detailed information on CNT0002505 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002505

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)17.40514.3715.82112.1356.37422.8125.18323.8362.2242.3712.4720.9391.92610.7267.274leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0246810121416182022242628

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MQDLSLVIYVTILELINNIAKLIVMLIMYS*

Sequence

>CNT0002505
CTTCAGTTTTATTAATGCATCACATCATCATAAGTCAACATCAATTTGATTGAATTTAGTCTTTGTTCACTCTTTTCTTCCTCCTACATCTAAAACCCCA
TAATTACAAGGCATCAAAGTGGTACCATTTTTAGGACTTGTCTCACCTTTCTTCCACTACCAAGTTCCTAAATGTGAAGCTCTCTTTATTTTACATGTTT
TTTCCACTTCAAAATTAGTTGTCTCTCGCATTTGATATTCAGGTGTCCAAGGAAACTCCTCTTTCTTGTTTAGAAGTTACCGATCAGCCTCATAGGCTAT
TGGCCATCTTCAACATGTTCACAATGCTAAAATTGGTTGTTCATAACCTAGCTTAGCACTCTGCACTGTTGACCAATGCTGCCTTTCTGACCAGCGACTT
TATCAAAAAGGCGATATTTTTTCCTGATCACATTCAGATCTTACCTTTACTGCACCTCTCCTGCGAACATGAAATTTTCTGCATGGATGGATGCAAGACC
TGAGCTTGGTCATCTATGTAACAATCTTAGAATTGATAAATAATATAGCAAAGCTTATAGTTATGTTAATAATGTACAGTTAGCATTTCGACATCCACTT
CTTTCCCCTCCCCCTAGCCTGTCCAATACCCTAAAAATACATACTAGTTTGCAAACTTATGGCTCATAGGCAAAACAACGCATCCTTTAGTCAGCTTCTT
TCTGACATTGGGGGCAAATATGGTACATAACTGTTGAAGGAGGAGCAATATCTGTTCGCGAAATCAAGTAGTCCAGAGCACAAGAATTTAGTTCACTGGA
CTCAATGAGCATTAGGTTACACTGTTAAGAGACGTTACATATTTTTATATATTGTATTGCTATTTTAGGGAGATTTGATTATAGGATCGGTGTAGTTAAT
TAGATTAATTACGTGGTCCTCCATGTCTTTGATTATTACTAGTTTCAAATCCATCTAGTATCTGTATAACCATTGGAATATGTTAGGTGGTAATTCTGCC
AATGAACTTGGATGTATAACCGTATGAGAAGATATGGCCATCAATTTGAATAGTATGAAACTCTTGCCAATTCCCCTAATTAAAAACATTTCGAATGCCA
CAGGAGATACAGATTAATCAAATTATTTGTCTTAGACAACTAAGAAATTTACCTATCTCTAATTATTGAATTCCAGCA