Detailed information on CNT0002743 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P18616|NRPB1_ARATH, E-value = 3e-42

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0002743

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MQSTKLRRRKVMTKNSFLNPSKGNRLFLQKGVLKRISDEDC*

>peptide 2 (36 aa)
MASECCHHAQRRKKRSTVKMDSIWRVWTYGFGLGRT*

>peptide 3 (66 aa)
MILQVLPIPPQIARPSIMMDTSSRSEDDITHQLAMIIRHNENLKRQEKNGSPAHIISDYCFPYCVT*

>peptide 4 (42 aa)
MLSSCSEEKKEIYRENGLYLESLDIRIWAWENIKCFGLWPIV*

>peptide 5 (40 aa)
MVKISGSWLKRVMVAAVLSSRRLLLRDENKCKVQSSEEEK*

>peptide 6 (40 aa)
MKINAKYKAQKKKSDDQEQLPEPIKRKQTLSTERCSEKDK*

>peptide 7 (39 aa)
VCKFGFMLCALFLVMCELLVIGIEILHALFYKFMRFNHW*

>peptide 8 (40 aa)
MYQIEKDWTHGRQQETIVGAQKATFKMEHVVRVFVLSNSW*

Sequence

>CNT0002743
AGTTTGTAAATTTGGTTTCATGTTGTGTGCTTTGTTCTTGGTGATGTGTGAATTGTTGGTGATTGGAATAGAAATCTTGCATGCATTGTTCTATAAATTT
ATGAGGTTTAATCATTGGTAGAAAAATAATTGGGATCGAGCTATGTTGCATCAATACTCATTCTGAGTGTTGTTGTGTGTGATTAAATATTGATACCCAT
AGCTCCATTCAATTGCTTGTCTCCTTTTTCTTATGAAATTATTGTTATATTAAATTGGGAACATGTAAAATTGTGTTGGAAATTGGAATTGGAGGATTTG
GGTCATGGGAACAAGAATGGAGGTGTCATGGCCTCTGAATGTTGTCATCATGCTCAGAGGAGAAAAAAGAGATCTACCGTGAAAATGGACTCTATTTGGA
GAGTTTGGACATACGGATTTGGGCTTGGGAGAACATAAAATGTTTTGGGCTTTGGCCTATTGTTTAGTATGTACCAGATAGAAAAAGATTGGACTCATGG
GAGGCAGCAAGAAACAATTGTGGGAGCTCAAAAGGCAACATTCAAGATGGAGCATGTGGTAAGGGTTTTTGTTCTATCTAATTCATGGTAAAGATATCGG
GGAGCTGGTTGAAAAGAGTCATGGTGGCTGCAGTGCTTAGCAGCCGAAGATTACTATTAAGGGATGAAAATAAATGCAAAGTACAAAGCTCAGAAGAAGA
AAAGTGATGACCAAGAACAGCTTCCTGAACCCATCAAAAGGAAACAGACTCTTTCTACAGAAAGGTGTTCTGAAAAGGATAAGTGACGAGGACTGTTAGT
TATTGGGCTTTAATCCTAAGTATGCTCATCCTGACCGGATGATTTTACAAGTTCTTCCAATTCCTCCTCAAATCGCAAGGCCTTCTATAATGATGGACAC
ATCCTCTAGGAGTGAGGATGATATAACTCATCAACTGGCCATGATCATAAGGCACAATGAGAATCTGAAGAGACAAGAGAAGAATGGATCTCCTGCACAT
ATTATATCTGATTATTGTTTTCCATACTGTGTCACTTGAATTAGCAATGCCAACTCTTCCAACATAGGATTTCAGCTATTGAAGAAGCATGGGTGGAAAG
AAGGGACTGGTCTTGGAGTCTCTGAGCAGTGGACAAAGTGGAAGCCTTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAATGAGGAAGATTAT
GTAATTGAAAAATTATTCCAATCCATTGTTGTTGGTATGCATATATATTTTATCTCTATTCTCTTGCTTGCATTTACTCTATATACAACATTATTAATGT
AACACTAGATGTTCGTGGGCTTCAAGAACACTTGCATCCAATCTGATTTTTTTTACATCTA