Detailed information on CNT0002785 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002785

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.70900.145000000000000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.050.10.150.20.250.30.350.40.450.50.550.60.650.70.75

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MCLLAENFRFVAEFYFCCNLCLRTFPFMNNHSSSCMFNCYNMDSCRS*

Sequence

>CNT0002785
ACTTACAATTGTAGGTTTGGTTAATATTTGTTAAGTTACTAATAATGTCATCAATTCTTAAATTTGTAGTGGTTTTCTGATGGATCACCGTTAGACGTGG
ACACCATCACCACACTTCGCCAGAAATGGGCAACATTCTTTTTAAGTATTAGGAAAAGCGGATGCTAAAGAGGATTTTCATTATGTAGTAGAACATTTTT
AGTGTGATTACATCATTTCGTTTAAAATTTCAAACAATTGTTTCATGTGACATTAATGGTTGCAAACAAACTACTTGATGGTTCGGTTAGCTAAGTGTAT
ATGAAAGGCACAATTAAGGTCTCCATTGTTTATGCTTAAATTGTTTTAGTTTGTGGTTTTATTTTATTACAAAATATTCATTTTAATAGGATCAACGCAA
TTATTAGTTCATAGATTCATTTTAATAGGTGACTTTTGTTAGGGCTCATGTTTACTATATGATTAATTAATTTTACCACTTGTTTAGCTTGTTTGAAGTG
TGATGCACTTGTTCAGTGTACTTGCATGGTGCAAGTTAAATAATCGAAAGAAACAGCTAACAACATAGACTTGGATGGCCTCGTCGTTATTGGTGGTGAT
GACTTAAACACTAATATGTGCCTTCTTGCTGAGAATTTCAGGTTTGTAGCTGAATTTTATTTCTGTTGTAATCTGTGTCTTAGGACATTTCCATTCATGA
ATAATCACAGTTCATCCTGCATGTTTAATTGCTATAATATGGATTCATGCAGGAGCTAAAATTTATAAATAAGTTTAAAAAAGATGCATTAAAACCATTG
AATTCATAACTCAGGACAACATTGATATGAAAGGTTGG