Detailed information on CNT0002793 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0002793

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)000000002.2461.0261.8142.5926.1880.4490leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.511.522.533.544.555.566.5

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLLIWSFHGYFIVFIMSCLGGCYIRSNRNTRRS*

>peptide 2 (41 aa)
MFIIICIQASGLTEFPPKFTIWVGIEMLFSVEREERLFFQV*

>peptide 3 (31 aa)
ITQYTATKIVIACTQCSDIAQTYFKHDETMN*

>peptide 4 (30 aa)
QLPNTLLRKLLLPVPNVLILLKLISNMTRQ*

Sequence

>CNT0002793
CAATTACCCAATACACTGCTACGAAAATTGTTATTGCCTGTACCCAATGTTCTGATATTGCTCAAACTTATTTCAAACATGACGAGACAATGAACTAGAG
CAGGACCAACATCGAGAGCAAATCCATCCATCCATAACACTACACCTCTAGGGATTCATTTCCGTACTAAATCACTACTTAGAACATTGCAGCTTAGAGG
AACCAAACGCAGCTTAGCTCCTTAGATTGATCAAAGGAGGGCTCCAAACCTTGGTTCCATGTTGAAGGGAGTGCTGCTGCAGCCTGTATTATGAAGATGA
TTGCATCCAATGGTGTTAGAAAGTTGCTCGGGGATCTATGATGGAAACTGCTGCATTTATACTGTTTGATTCAGATTCTTAGATCTTGCTGAAAAAGAAA
TGTCAAGTTGCCAAGAGTCAATTTTTTTTCTTTGCAACTTCCACAGATTCTTGATCTTTCTTTCCATTGATTTTTTATAATAGTTGTGACAGAAAATGTT
TATCATCATTTGTATTCAGGCCAGTGGTTTGACTGAGTTCCCTCCTAAATTCACCATATGGGTTGGAATAGAAATGTTGTTTTCGGTTGAAAGAGAGGAA
AGATTATTCTTTCAAGTATGACATTCTGTACAGGAAAGATTTTGATGTCGCTGTTTATTATGAACCATATTTCTGGCTAGTATTTAGTATGTTGTTAATC
TGGTCCTTTCATGGTTATTTCATAGTCTTTATTATGTCCTGTCTCGGTGGATGCTATATCAGATCAAATAGGAATACAAGAAGGTCTTGAACTTTGTGTG
TCCCACTTGGTAGAGCTGAAGTTGGATTCTATTTATGTTTTGAGTGGGGGTGTAATTACGCATGAAATTGCAAGGGTGGGGGATTTCATATTATTAGATG
CTATAGG