Detailed information on CNT0002809 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O65570|VILI4_ARATH, E-value = 3e-20

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002809

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MMKIGGTFIFVPQDSMPLLTYGYGSHLALIVYSLTFKVVVFGNDKAAMLADFWEYPHFLEIKLCCYGSVI*

>peptide 2 (68 aa)
MAVSMRDLDLAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKINFRLHFSLEHNWKKL*

>peptide 3 (54 aa)
LTFSSLVLYPSILSLNLISLPLLPFHRKFSFLRTSPVFFAIFKLVNRRILWLFP*

>peptide 4 (43 aa)
SLSLLSCFIRPFSLSISFLCLCFHFTVSSHFSVPHRYFLQYLN*

Sequence

>CNT0002809
CTCACTTTCTCTTCTCTCGTGCTTTATCCGTCCATTCTCTCTCTCAATCTCATTTCTCTGCCTCTGCTTCCATTTCACCGTAAGTTCTCATTTCTCCGTA
CCTCACCGGTATTTTTTGCAATATTTAAACTAGTTAATAGAAGAATATTATGGCTGTTTCCATGAGAGATTTGGATCTAGCTTTCCAGGGAGCTGGACAA
AAGGCTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCAAAGTCCTCTTATGGGAAATTTTTCACTGGAGACTCCTATGTGATCT
TAAAGATCAATTTCCGTCTTCATTTTTCTTTGGAGCACAACTGGAAAAAACTCTAAAAACCACAAGCTCTAGAAAAAGGAAGCATTTGTCAGAACCTTTA
TCTGAAGCACAACTGGATATCAATGGCTTAGCAACAAGTTCACCAAATGTTCATCAAACGCAAGTAGGAAATAAAATAAACCCCATTCCATGTTCCAAAG
GATGTTTTTTCCTCCTTTTAAGGGGGTTTACTAACCGTACAAAAAAGAAAAGAAAAAAAATGATGAAAATAGGGGGAACATTTATTTTTGTACCTCAGGA
TTCAATGCCATTACTAACATATGGATATGGCTCTCATCTTGCATTGATTGTGTATAGTTTGACATTCAAGGTGGTTGTTTTCGGCAATGATAAAGCCGCT
ATGTTGGCCGATTTTTGGGAATATCCTCATTTCCTTGAAATAAAACTTTGTTGTTATGGATCTGTGATTTGAGTAAAGAGTGGGATGGGACATCATATCT
TCCAATTGCTGCATGCACGTTGATTAACTTAATAATCTCTTACTATTATGCACGTTGTTATTACATTATTAATTTATTTTTTTATTTGATCATGTAGTAT
TTTAATGAAGTTAGACCATTAGAAGCAGAGAGATTCAAGGCGCTTCGTATCCAGTGGGCACAACATTATCTAAAAGTTAGAAATCAAACATAAGATGTTA
GGC